EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-00448

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:60099020-60099640

Target genes

Number: 8
Name	Ensembl ID

Sumo1	ENSMUSG00000026021
Nop58	ENSMUSG00000026020
Snord70	ENSMUSG00000077345
SNORD70	ENSMUSG00000077358
SNORD11	ENSMUSG00000089512
Ica1l	ENSMUSG00000026018
Carf	ENSMUSG00000026017
Abi2	ENSMUSG00000026782

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLIS2	MA0736.1	chr1:60099493-60099507	CACCCCCCGCGAGG	+	6.34
Lhx3	MA0135.1	chr1:60099042-60099055	ATATAATTAATTT	-	6

Enhancer Sequence

CCAGTAAATG TATAACTGAA AGATATAATT AATTTCCATT AAAGAATGAG GTACCTGTAG 60
CTGCTAAATA TTGATGTATT TACAATATTA CTTTACAAAA CTTCGCTTAA GCCAGAATCA 120
AATAATCCAA TACTTAAATA CTTAGAGCCC AAACCGCAGG GAAACATCAT CTCCCCACAA 180
ACTATTTCAG CGACCCAGAG TTGCTAGCAG GTTGTGTGTT TTGTGCATGA AGATCATACA 240
TTATATGGCA TCCCCGATTC ACACACACTA CTGGCAAGCC CACAGCTCAC GGGTAGGACG 300
CCAAGCAGGA TTGTTTTTCC CGTCTCCATT TTTCTTAGAG CATCAGGTAT CGGCTGCCTG 360
CATCATCACC CAGGTGAGGT CAGTGGTCAG AGACACCTGG CCTGCTTTTC CCCAGCCGAA 420
TCCGTGCGGT GATGCTGGGG TCCCCACCTG GGAGAGGAGG CTTTGTGCAC CGACACCCCC 480
CGCGAGGTGA TGCATTCCGA CATCACCACG ACCCGCAGCT TTGCTTAGGT TCTGTTCTCA 540
CCACGTCCAT CTCGCAATTG GTCTGTTCTG AAGACATCCC ACAACAGGAC AATAATAGTA 600
ATAAATTAAG CGCGACGTAC 620