EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-00342

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:52053190-52054910

Target genes

Number: 5
Name	Ensembl ID

Myo1b	ENSMUSG00000018417
Gm8420	ENSMUSG00000072324
Stat4	ENSMUSG00000062939
Stat1	ENSMUSG00000026104
Gls	ENSMUSG00000026103

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXK1	MA0852.2	chr1:52054237-52054251	TTCTTGTTTACAAT	-	6.03
Foxo1	MA0480.1	chr1:52054238-52054249	TCTTGTTTACA	+	6.02
IRF1	MA0050.2	chr1:52054181-52054202	TGTCAGTTTCTGTTTTAGTTT	+	6.78
NFYA	MA0060.3	chr1:52053316-52053327	TCTGATTGGTC	-	6.14
Nr5a2	MA0505.1	chr1:52053752-52053767	CCTGACCTTGACTTT	-	6.41

Enhancer Sequence

AAAGTAAGTC TTACCTTACA TGGCTGACTA TGACTGCTTT GTAAACAATG TGCTTTCTTT 60
CTAAAAACTT TCTCCATATC CCTAGGCTTA CTTCTCAATC ATAAAGATAG AGTCAAGACT 120
GGGTGCTCTG ATTGGTCGTC CAAACGCATC AGTATAAAGT GTAGGTCATT AAAAAAAAAG 180
TATGTTGCTG TACTGAGACC TGTGTATTCT TGACAAAGAA ATCTAAGATG AATTGAGACT 240
ATAGCAACTG CTCCAGAAAG TTCTAGTCTC ACATCCTAGA TCTTATAAGA CCCACCCTGA 300
AAATGTTGAA TTAACTACAA TCAGAATGTA AGAAGGACAT ATATCTCTGA AGGAAGACTG 360
TTCACTTGCT AGGAAGCCCA CTGTCTAGAG GTGAGAAACT CAGGGTTTCA GCTGTGATGT 420
TGAGTAAATC CTGCCAGCTG GGTAAATAAG CCTGAAACAA TGGGCACTCT GAGCCAGTGT 480
TTACACAGTG CAGCTACAGC AGAGGTGACT GTGCCACTCT TTTTCCCAGG TTGGCTTTGT 540
CTCCTGGTGT TCTCAGGGGT AACCTGACCT TGACTTTAGT GCCAGCACCA TTTATGAGCG 600
TCTAATTGCC TGCCACTAGA TAGCATTTCT GCCATTGGCT ATCTCCAAGG CAAAGAGCAG 660
CACCATTGGA AGTTCCCGTT TAAGGCATTA AGTGGGGCAT GAGTAGAGCC AACTAAAACA 720
GTTCAGTGCT GTCAGGATTG AATGGGAAGA CAACGGAGTC ACTGTATGTC TCTCTTGGCT 780
CTGGCCCAAA GCACCGTGTT AAAGTCCCAA TCTGGAGAGC CTGACCTTTG TAGAAAGATC 840
AGTTGTCTGG ATGACTTAAT CGGGTTTCCC CTGTTAATCT CTGTATGTAA CTCATTGTTA 900
GAGCTATTAA GCAGCATCCG GTGGAAATTT CTGGAAATAG TATAGAAACG GTCCAAAATC 960
TAAACACGGG GAACTCAGCC TGCCCTTATG ATGTCAGTTT CTGTTTTAGT TTAAATATTT 1020
TTAGTGGAGA GTCAAGTTAA GCCAGACTTC TTGTTTACAA TGGAGCAGTA TTGAATTTGG 1080
GCAAGAGGAC AATGTACTTA CAGTAGAGTT ACCACTGTGC AGTTGGTTAT GTCAAAATCT 1140
CATATTACAG CTCGTTAAGT GGATGTTTCT GACAGGGCTA GACAGGACAA GCTTCTTTAC 1200
CCTGAAGGGA TGGCAGGCCA AGAGCCATCG TTAAGGGAGC CTGAACATAT AACTCTTCGG 1260
TATTTCACCA TGGATCTTAC AATCCCTTTT TTTGTTAATC TCTCTTTTGT ATAATTGTAG 1320
CACTTGGAAT TTCCTATTCT ATGCACTGAT AAGAAAGTGA GTGTGGGGGG CATGTTTATA 1380
TTATAAGTGA ATTGGAGTGT TGGAGTTCTA TGCTGTTAGA ACTTTCTAAA AAAAAAAAAG 1440
TTCTATGTGA CAAACCAACC AACCAACATG ACTGGCTTTA GGCTTCCTAA ACAAAGAACT 1500
TAAAAAACAG CAACTTATTT GTAAGATACG GCCAGAGAGC ACTTGTCTAA GAAAGGAAAC 1560
TTTGCTATTG TGACTCCAGC ATCTTTATTT AGATGATTTT TAAATGTAGA AATTTGCTAT 1620
AGTGGATTCT ATGAAGAGAT AGAGAGATAG GAGGCCTGAG CCACCCTTTG GCATCACCAC 1680
CCTTTGTAGA TTTGAGATCC CAGAGCAACT AAGGCTTAGA 1720