EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-00225

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:37752840-37754720

Target genes

Number: 5
Name	Ensembl ID

Mgat4a	ENSMUSG00000026110
Tsga10	ENSMUSG00000060771
Lipt1	ENSMUSG00000037216
Mitd1	ENSMUSG00000026088
Mrpl30	ENSMUSG00000026087

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1

MA0002.2

chr1:37753909-37753920

CTCTGTGGTTT

6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04112	chr1:37752601-37756826	Cortex
mSE_10794	chr1:37752455-37757050	Olfactory_bulb

Enhancer Sequence

AAGGCTGATA TCCCTGGTGC AACTCTTATG GCTAAGGAAA GAATTCCTGC TTCATCTGCT 60
AGGTCCCCAG ATACTACTTG ACCAGTGAAG ACATGGTCAC GCTGGCACTG ACACTCTCCA 120
ATGCCCTCAG ACCAGTGAAG ACTGGATCTA ATCTGGGTAC CAGTATCCCA TACCCCAGCA 180
CAGACAAGGC ACCCACAACT CTGGCCCTTT CAAGTCTTCT TGGTGACAAC AGAGCTAGGC 240
CATATAGCCT CCTGACAACA CAGACAACAG TCACCATGGC CATCTGGGGT GTGAAGGTAC 300
AAGTTGCCTG GCACAGCCAC AGAGCTGACT GCCCCGAGGC CCTTCAGAGG TCTTCATTTC 360
CTTCCCAGAC AGTTCTGTTC ACATGAGTAG CCACACAGAA ACACTGAGCA CACCGAGTGC 420
GCTGGCAAAG TTAGCACCGT GTGCCCACAC TGCACACTGG GATCTTAAAC GCCATTCTCT 480
CTTCTAGATC AACGTGGACA CTCTCACAAT TCAACGGCCA CCATTCCTTC AGGCTGACTC 540
AGCTGGTGGC TTCCCGAGAG CCCAATCCCT CCATGCCCCC TGGGTTTTTG TCCTGAAGAT 600
TGGCAGAGTG ACAAGTTCTG TTTCCCTGTG TTCTCTGGCG ACAAGCACCA GCCTCTTCAG 660
CAAGATACCT GTGTAGGAAA AGGCATGAGG GCAGATAAAA TGCTCTGTGA TGTAGCAAAG 720
CCACGTGGGA ACAATTGCTG CAGCTTACAA AGGGCAAGAA GAGTGCCAGA TGGAGCCCCA 780
TCTTAGCCCC CCTCCCCCTC CAGCTGTTGG GCTCAGCTCA GGTATATGTC TACCTGCCTG 840
ATGTGCCAAG GCACTGAGCT GCTCTACCTG GCCAGACCGT AGGCAGTAAG GATGGTGACC 900
ACCATGCCTG TCTGCCACTC GTCCTGGGAG TGACATGGCA ATCACACTAG CTGTGAGTAC 960
AGACAGCCCA CTCTTGAACC AACTGTTCAC CTACAGCTGG GTGTGTGCCA GGAGCCACAG 1020
GCTTTCTCTT CACTCTGAAG CCTGTGGTGA CTCCAGAGTT GTGACCCCCC TCTGTGGTTT 1080
GTGGCTGCTG CCTGGCATGG TCTCACCCTC CCCACCACAG CCCTCCTAAA GCACAGTTGA 1140
GCTAATTCTG GGCTCCCTGC CACCCTTGCA AGCCCACGCT GCACTTGCTC TGACTCATGC 1200
CGAGGTGCCC AGAAGCAAGC TCAGGAGAGA CGCTGCAAGG CACCTGCTGG GCCCTGGGCA 1260
GCAGCTGGGA CTCCAACCTC AGGCTCATGA AGGATCCAGA GTTAGCTCTG AGGTCTCCCA 1320
ACGACCTTCA CCCAATCTCC GTGGAAGATG AACCCAAATG TCAAGTTGTG TAAGCTGCAC 1380
AGACACCAAC TTCATAATGT AGATCCACTG AGACCCTGGA GTTAAATGTT TGCTCTTTAT 1440
AATCAAGACC TACTTCAGTG TGTGGCGAAA TCTTCTGACA TTGACAAAGT TCTCAGACAC 1500
AAAAAGCATT ACACCAAAAA TGAAGATTAT AGGTATCTAA TGGTTCCAGC CAACCTGCTT 1560
CAAACGCTAT TTTCTGAACA CCTATTCAGG CTCTTTTCCT CCATGTCTTT AAACTCAAAG 1620
CCATCAACAC CAGAGCCTCA GACTGTCAGG GGAAGAGGCC TACATTCCTG GCCCACCTCT 1680
GACAGGTAAG AATGGAATAC TAGAGGAGAG AGAAGCAGGG ACAGCCACAT CTGTCCAGAG 1740
GTGACAGAGG AAAGACAGCC CAGAAGAGTC GCCTCAGGGT GGCCTGTGGG TAGTCGGCTA 1800
GGGGAACAGG CTCTCTGGAC AGACAGGACA CGGTTGTGAG GCCTATGGTT CTGTTTGGAG 1860
AGCAAGGAGA ATTAAGGCTG 1880