EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM121-00171

Organism

Mus musculus

Tissue/cell

NPC

Coordinate

chr1:34640090-34641970

Target genes

Number: 8
Name	Ensembl ID

Mir5103	ENSMUSG00000092852
Ccdc115	ENSMUSG00000042111
Imp4	ENSMUSG00000026127
1700101I19Rik	ENSMUSG00000045815
Fam123c	ENSMUSG00000045174
C230030N03Rik	ENSMUSG00000089955
Arhgef4	ENSMUSG00000037509
Fam168b	ENSMUSG00000037503

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr1:34641048-34641067	TGCTGCCATCTAGAGGCAA	-	6.53
Myod1	MA0499.1	chr1:34641784-34641797	AGTGACAGCTGCC	-	6.04
TFAP2A	MA0003.3	chr1:34640698-34640709	TGCCTGAGGCA	-	6.02
TFAP2B(var.2)	MA0812.1	chr1:34641495-34641506	AGCCTCAGGCT	+	6.02

Enhancer Sequence

AGATCTTGAT CATTGGTTCA GGGGTTCAAG TCCCAGCTTT ACTACCAATG GCTTAGTTTA 60
TTGGCTTTTC TGAAGTTGAA TTTTAGAAAA GGAATTCTTT TAATTTTTAA TGATGTGCAT 120
GCATGAGTGA GTATGTGCAT GTATGAGTGA GTATGTGCAT GTATGTGCAG ATACCTGAAG 180
AGGTGAGGAG ACAGGGTCAT ACCTGCACCC CCTTCTCCCA GAACTGGGAG TTACAGGTGA 240
TTGTGAACTC CCTAGTGTGG GTTCTAGGAA CCAAACTCTG CTCTTCGGAG AGAGCAGCAC 300
GTGCTCTTAA CTGCTAAGTC ATTTCTCCAG CCCTGAGCTC ATACTTTGTA AAGTGATGAT 360
TACAGTAGTT TGTCCCTTGT AAGCGTAGGG GCCAAGCTTT CTGCTTGGTT AGGTGGGTAA 420
TAGCAATGCT CAAGTTGAGT CCCTTGCCAC CAGACCCTGC ATAATAAGCA CTTTGCCATG 480
TGCATTAGAG CTCACCAAAC CTGTAAAGGA ATGCGAGAGG CAGAATGCTC TGAGGAGAAA 540
TCTGCAGGGT CAGGATGGAA AAGGCTTGGG CCCTCGCCAT CTCCCAACAA GCTGAACAGC 600
AACCCTGATG CCTGAGGCAC GGTGCCCACC CGTCTCCCAG GAGACTGAAA AGCCACCATG 660
GCACCTGAGG CACGGTGCCC AAGAGCTATT GTGCTGTGAT TAAAGGAGCC ACACAGAGGG 720
AGAGCTAAGC CTGTGCTCTG TGGCTCTCCT GAACAATGCA GACTACTTGT CTTGTCCCCC 780
AGCCAAAAGT CCCAGATGTC ACTTGGACGG GAGAAAGTGC TACCCCCCAG GTGCAAGCAG 840
GTGGCAGCAG TGCAGTCAGC TTGCCCATGA GTCCCTGTGA TGCTGGCTTT GCCCACTTGA 900
AGCTGCATGC AGGGGCACTT CTGGGACTCT GGCCAGCCTG ACTGCCAGAT GGCTTTCATG 960
CTGCCATCTA GAGGCAACCA GGAGGCTTCT TTGGGGCAGT TTATAGGGCT GAACCTGCTG 1020
CAAGCCCTCC TCACAGGCTG GGGCTGGGAT GAACAAATGC AGGGGATGAC CACAGAGCAG 1080
TCCTAGAGAG ACCTCAGCCT CAACATCTCT AGCCAGGTGG ACAGAGGCTG ACCTTCAGGC 1140
CACAGGCAGA GAGAGTTTCT GCTAGGGCTG GGGAAAGAGC TCAGAAGGTT CTCCAGCCAT 1200
GCGCTGGTTT TCCATTTCTT GCTAGGGTCC TCTGGCTCTA TACATCTACC CTAAGGGCTG 1260
CATGTTCTAA ACCAGATTCT TCTCTTACAA GCCAGCCCTT TGGTCTCTAG TGTCAGGACT 1320
CCCGTCCTGC CTTCTTTTTA TGTGACTCCT GAAGCCTGGC ATTCCCCCCC CCCCCTTTGG 1380
AAGACTCTGA CTCCACTTCT AGAACAGCCT CAGGCTCTTT GGTCAGCCTC TTGTGGTTCC 1440
TTTCTCCTCA TCGATTCTGC AAGTCCGGCC TCCTTAATGT CCCTGCTTCC ACACACTCAC 1500
CAGAAGACTC AAGTGCTTCT GGGATCCCGG GATACAGCCA GGGAAGGCCC AGCTATGACA 1560
GAACAATCAA GTCACTAGCA CATTCACCAC CCAGCAAAGC CCCCGACTCC CAGTGCTGAC 1620
TGTAGCATCT TCTGCCATGA ACTCAGCCTG GTCACCAGAA ACCATCTCTA GATGGACTCC 1680
AGGCGATATC TGTCAGTGAC AGCTGCCTGC CTTTCTGGTC CATGATATTC TGTGACATGT 1740
GCTGTGCCTT GCTGCCATGA GATTCCCTCC TCCCCTGGCT CATGCTTTGC AAACCCTGTG 1800
AGATTTTTGG CTGCCTCTTG CTTGAGAGCC TCGGTACAGA CTGAGTCTTA CTTTCCCCAG 1860
CAGATGCCTG GTCCTCCCTT 1880