EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM120-00007

Organism

Mus musculus

Tissue/cell

NKT

Coordinate

chr1:21322430-21324800

Target genes

Number: 9
Name	Ensembl ID

Tmem14a	ENSMUSG00000025933
Gsta3	ENSMUSG00000025934
Gm4956	ENSMUSG00000025936
Khdc1a	ENSMUSG00000067750
Gm16329	ENSMUSG00000086194
Khdc1c	ENSMUSG00000041722
Khdc1b	ENSMUSG00000085079
Gm16328	ENSMUSG00000085679
Gm7658	ENSMUSG00000082935

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:21324057-21324069	AAACAAACAAAC	-	6.32
Foxq1	MA0040.1	chr1:21324719-21324730	AATTGTTTATT	+	6.02
PKNOX1	MA0782.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.04
RUNX1	MA0002.2	chr1:21323886-21323897	TTCTGTGGTTT	+	6.32
TGIF1	MA0796.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.27
TGIF2	MA0797.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.37
ZEB1	MA0103.3	chr1:21323482-21323493	GGGCAGGTGCG	-	6.02
ZNF263	MA0528.1	chr1:21323778-21323799	GAAGGAGGAAGTAAAGAGGGA	+	7.03

Enhancer Sequence

TATCTGTATA GCCCTGGCTA TTCTGGAACT CACTCTGTAG ACCAGGCTAG CCTCCAACCC 60
AGAGATACAC CTGCTTCTGC ATCCCGAATA CTATGTGCTA CCACCATGCA GACATGAATT 120
TTCTAATATT AGCTCTCTGG TACTGAGAGA GGTAGAACAA CTGGATATAT TCTTCTGGGT 180
GACTAAATCT AGGGACTTAC TTATACTAGT CAAGGGTTGT GTCACTGAGC TACACCCTAG 240
CCCTTACATA TATATCTTAA TTGAGTTTTG TTTTTTTTTT TTTCTGAGCA AATGTTTAGA 300
AATTAAAGTA ATAAAATTTT ACTTTTTTTT CTTTCATGAT GTTATACAAT AAAATATTAG 360
TTATCTACAG TTCATTCTTT TTTTTTTTTT TTTGAAAAAA GTTGGGAACT AGAGAGATGG 420
CTCAGCAGTT AAGGCCCCTA GCTGCTCTCC TCAAGGACCC TGGTTTGATT CCCAGCACCC 480
ACCCACATTG CAGCTCACAA ACATCTGTGA CTCCAGCACC AGGAGACCCA ATGTCCTCTT 540
CTGGCTTCCT GGAACACTGT AACATGGGGT AACAGACATA CACTCAAGCA AAACACACAT 600
ATGGATACTG TGGTATTAGT ATTTTAATAA ATCCCGGTGA GGGGTTACTA CCCACCTCAA 660
TGGTTGATGT TCCTGGATGA AAGACACACA CACACACACA CACACACACA CACACACACA 720
GCCTTTATAT TTAATATGCC TTAAGCTGCA CAATAGCTAA CCTCCAGTTG TTAGAATCTT 780
CTTCTATCCA TAACCCCATT GTTTCTTACT AATTTCTATG TTCCCTCTGG GCCACGTTTT 840
CTTGTCTCAC AGCCCAGGAT GCTCTCCTTG CTTTTTTATC CCATGGCATC TCTTGTCTCT 900
ACCCTGCACA CTCCTAAGGC ATGGCATCTC TCTCCTCTCC TGCTTCCTAG CAGCCCCAAG 960
ATCCCAAGCC CAGGAACCCT AAGTCCTCGC TCTCTCTCTC CTCCCCAACT ATTGGCAGCT 1020
CGTATCTTTA TTTACCAATC AGAATTAACT GGGGGCAGGT GCGTAGAAGC TATGTGCAGA 1080
CTCTCTCGTT GTAAACAATT TTGGGGTGGG GGTGGGGCGA AATTATCATC AAAATACAAG 1140
CAGCTACAGC ATACAATACA AATAAATCTT AAGAAAATTA ACAGTTTGGT AAAACTATGT 1200
CCCGACCCGC AGGACTCAGT TATTCTGGGG GCGGAGGGGT CCGAGGGGGA CCATGCCTGA 1260
AAGAGAAACG GGCGAGAAAG AAGGAGCGAG ACTAAGCAAT GATTGTCAAG GTCTGTTTAT 1320
TGTGAGCAAG GTTACAGAAT ATAAGAAAGA AGGAGGAAGT AAAGAGGGAG AAACCTGCGG 1380
GAGCCTCAGC CCGGGGGCGG GGGTGGTTCT ACATAACTGC CTGGGAATAC ACTATCTACT 1440
CTTAGCTCAG GGGACATTCT GTGGTTTTTC TCGGAAAGTT TGCAGAGACT ATTATCTGAT 1500
CTTGATGTTC TGTCAGCTGT CATTTCAAAA GGTCAGAAGT TTCTCAAGAA GGGAGGGGAA 1560
CTTTGGCTCA CAGTACAATA TCCATCCCCA ACAAAACTAG TTATAAAAAT CAAGAATTGA 1620
CAAAACAAAA CAAACAAACA AAAAGCCGGG CGTGGAGGCA CACAGCTTTT ATCCCAGCAC 1680
TTGGGAGGCA GAAGCAAGCG GATTTTTGAG TTCGAGGCCA GCCTGGTCTA CAAAGTGAGT 1740
TCCGGGATAG CCAGGGCTAC ACAGAGAAAC CCTGTCTCGA AAAAAAAAAA GTAAAAATAA 1800
GAAGTATGTA AAGGAGACAA AAATCAAGTG TGCTTAAACT TCAAGTACCA GGAAACCCTG 1860
GTCAAACTAG GCATACAAGA GGTCCAGGCA CAACTTGTCA AGGGCTCAAA TTCAATCTCT 1920
GTATGTCTCC TCCCTCTTCA GTCTGGTAAC ACAATACTCG TGTTGCTGCC CAAATCATAC 1980
TGGGTCCTAG CCCCCAGGAG AAGAGTTGAG ATTCGTTCCT GGTTCTCTTC TCAGAAGGGA 2040
GAAAAAACAT TTTCTAGAAA TGCCCAAATT TTCCTTAATT GTTAAACTGA TGCCATTTCT 2100
TTAACCAATC GCTGGCAAGA ATGATGGGAT TGTCTCTGTC AGTGTACACC AATCAGCTGG 2160
AGTCGTGCTA GCCAAGACCA ACTAGGTTCT TGCCTTCTAC AAGGTTCTTG CCTTCTGTAT 2220
TGGAGGTCCT CTGGGTATTT TTAACTTCCA AATGTCAGCC AGTACCTGGT GACAGTGGTG 2280
TAGTTCTCCA ATTGTTTATT TGTTAGGGAA TAAGAGTCTG CAGACTCTAA TGTAGAGTAC 2340
AATAGAAACT ATATTCTCAT ACAAATTCGC 2370