EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM119-00033

Organism

Mus musculus

Tissue/cell

NKC_spleen

Coordinate

chr1:21322810-21324730

Target genes

Number: 8
Name	Ensembl ID

Tmem14a	ENSMUSG00000025933
Gm4956	ENSMUSG00000025936
Khdc1a	ENSMUSG00000067750
Gm16329	ENSMUSG00000086194
Khdc1c	ENSMUSG00000041722
Khdc1b	ENSMUSG00000085079
Gm16328	ENSMUSG00000085679
Gm7658	ENSMUSG00000082935

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:21324057-21324069	AAACAAACAAAC	-	6.32
Foxq1	MA0040.1	chr1:21324719-21324730	AATTGTTTATT	+	6.02
PKNOX1	MA0782.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.04
RUNX1	MA0002.2	chr1:21323886-21323897	TTCTGTGGTTT	+	6.32
TGIF1	MA0796.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.27
TGIF2	MA0797.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.37
ZEB1	MA0103.3	chr1:21323482-21323493	GGGCAGGTGCG	-	6.02
ZNF263	MA0528.1	chr1:21323778-21323799	GAAGGAGGAAGTAAAGAGGGA	+	7.03

Enhancer Sequence

TTTTTTTTTT TTTGAAAAAA GTTGGGAACT AGAGAGATGG CTCAGCAGTT AAGGCCCCTA 60
GCTGCTCTCC TCAAGGACCC TGGTTTGATT CCCAGCACCC ACCCACATTG CAGCTCACAA 120
ACATCTGTGA CTCCAGCACC AGGAGACCCA ATGTCCTCTT CTGGCTTCCT GGAACACTGT 180
AACATGGGGT AACAGACATA CACTCAAGCA AAACACACAT ATGGATACTG TGGTATTAGT 240
ATTTTAATAA ATCCCGGTGA GGGGTTACTA CCCACCTCAA TGGTTGATGT TCCTGGATGA 300
AAGACACACA CACACACACA CACACACACA CACACACACA GCCTTTATAT TTAATATGCC 360
TTAAGCTGCA CAATAGCTAA CCTCCAGTTG TTAGAATCTT CTTCTATCCA TAACCCCATT 420
GTTTCTTACT AATTTCTATG TTCCCTCTGG GCCACGTTTT CTTGTCTCAC AGCCCAGGAT 480
GCTCTCCTTG CTTTTTTATC CCATGGCATC TCTTGTCTCT ACCCTGCACA CTCCTAAGGC 540
ATGGCATCTC TCTCCTCTCC TGCTTCCTAG CAGCCCCAAG ATCCCAAGCC CAGGAACCCT 600
AAGTCCTCGC TCTCTCTCTC CTCCCCAACT ATTGGCAGCT CGTATCTTTA TTTACCAATC 660
AGAATTAACT GGGGGCAGGT GCGTAGAAGC TATGTGCAGA CTCTCTCGTT GTAAACAATT 720
TTGGGGTGGG GGTGGGGCGA AATTATCATC AAAATACAAG CAGCTACAGC ATACAATACA 780
AATAAATCTT AAGAAAATTA ACAGTTTGGT AAAACTATGT CCCGACCCGC AGGACTCAGT 840
TATTCTGGGG GCGGAGGGGT CCGAGGGGGA CCATGCCTGA AAGAGAAACG GGCGAGAAAG 900
AAGGAGCGAG ACTAAGCAAT GATTGTCAAG GTCTGTTTAT TGTGAGCAAG GTTACAGAAT 960
ATAAGAAAGA AGGAGGAAGT AAAGAGGGAG AAACCTGCGG GAGCCTCAGC CCGGGGGCGG 1020
GGGTGGTTCT ACATAACTGC CTGGGAATAC ACTATCTACT CTTAGCTCAG GGGACATTCT 1080
GTGGTTTTTC TCGGAAAGTT TGCAGAGACT ATTATCTGAT CTTGATGTTC TGTCAGCTGT 1140
CATTTCAAAA GGTCAGAAGT TTCTCAAGAA GGGAGGGGAA CTTTGGCTCA CAGTACAATA 1200
TCCATCCCCA ACAAAACTAG TTATAAAAAT CAAGAATTGA CAAAACAAAA CAAACAAACA 1260
AAAAGCCGGG CGTGGAGGCA CACAGCTTTT ATCCCAGCAC TTGGGAGGCA GAAGCAAGCG 1320
GATTTTTGAG TTCGAGGCCA GCCTGGTCTA CAAAGTGAGT TCCGGGATAG CCAGGGCTAC 1380
ACAGAGAAAC CCTGTCTCGA AAAAAAAAAA GTAAAAATAA GAAGTATGTA AAGGAGACAA 1440
AAATCAAGTG TGCTTAAACT TCAAGTACCA GGAAACCCTG GTCAAACTAG GCATACAAGA 1500
GGTCCAGGCA CAACTTGTCA AGGGCTCAAA TTCAATCTCT GTATGTCTCC TCCCTCTTCA 1560
GTCTGGTAAC ACAATACTCG TGTTGCTGCC CAAATCATAC TGGGTCCTAG CCCCCAGGAG 1620
AAGAGTTGAG ATTCGTTCCT GGTTCTCTTC TCAGAAGGGA GAAAAAACAT TTTCTAGAAA 1680
TGCCCAAATT TTCCTTAATT GTTAAACTGA TGCCATTTCT TTAACCAATC GCTGGCAAGA 1740
ATGATGGGAT TGTCTCTGTC AGTGTACACC AATCAGCTGG AGTCGTGCTA GCCAAGACCA 1800
ACTAGGTTCT TGCCTTCTAC AAGGTTCTTG CCTTCTGTAT TGGAGGTCCT CTGGGTATTT 1860
TTAACTTCCA AATGTCAGCC AGTACCTGGT GACAGTGGTG TAGTTCTCCA ATTGTTTATT 1920