EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM118-00928

Organism

Mus musculus

Tissue/cell

NIH-3T3

Coordinate

chr1:122652880-122655810

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr1:122654275-122654286	CTGAGTCACCC	-	6.02
FOXP1	MA0481.2	chr1:122654625-122654637	ATGTAAACAGAG	+	6.32
FOXP2	MA0593.1	chr1:122654625-122654636	ATGTAAACAGA	+	6.02
JUNB	MA0490.1	chr1:122654275-122654286	CTGAGTCACCC	-	6.02
NR2C2	MA0504.1	chr1:122652936-122652951	AGAGATCAGAGGTCA	+	6.22
NR2C2	MA0504.1	chr1:122655236-122655251	GAAGGTCAGAGGTCA	+	7.33
Nr2f6	MA0677.1	chr1:122655237-122655251	AAGGTCAGAGGTCA	+	7.28
RXRB	MA0855.1	chr1:122655237-122655251	AAGGTCAGAGGTCA	+	6.55
RXRG	MA0856.1	chr1:122655237-122655251	AAGGTCAGAGGTCA	+	6.58
Rxra	MA0512.2	chr1:122655237-122655251	AAGGTCAGAGGTCA	+	6.62
TFAP2A	MA0003.3	chr1:122655588-122655599	AGCCTCAGGCA	+	6.32
TFAP2B(var.2)	MA0812.1	chr1:122655588-122655599	AGCCTCAGGCA	+	6.62
TFAP2C(var.2)	MA0814.1	chr1:122655588-122655599	AGCCTCAGGCA	+	6.62

Enhancer Sequence

AACTATTTTA AAAAGTATGT GTGTGCATAT GCCTGTATAT GTATGCCAGT GTTTATAGAG 60
ATCAGAGGTC AATGTTGGGT GTCTTCTTCA ATCTCTCTCT ACCATTATTT TCCTCTTTTG 120
AGACAGTCTC TCATTGAATC TGGGGCTCAC CAATTAGCTC CAATGGCTGG GCAGCAAGCC 180
CCAGAGAACC TCCTATCCCC ACTGTCCCCA GGTATGAGCC TTCAGGTATG CAGTGACACT 240
CCTGGGTTTT TTAATGGGAG CCAGGGATTC AAGTGTGGGT CCTTGACAAG CACTTTACCC 300
ACAGACCCAT CTCTCCAGGT CTGATTATAA TTATTATAAT AATAATTATT AAAAGGCATC 360
CTGTATGTTT AGTGTCAATT CAGAAGTATT TGTCATTTCT GATCCCGACT CTCACACTGT 420
CCCAGGCTAT GATTACCCTC TTCCTCCAGC CTGCTAAATC CTGAGCTTAC AGGCGTGTGC 480
TACCATGCCT GGCAAACACC CTTTAGTACT TGGCCTCCAA TAACTGAGTT TGGTTTAATT 540
AAGTAATCAG ATGGACTATC ACAGATAAGC CAGTCCTGAA CACAAACAAC AAAGGAAAGT 600
ACTTCTAAGA CACAGCCATT CCTGTCAGGT TCTGATCACT ATCATCTTGA TGGTTTTTAT 660
CTTTTGTATC ATAAAATAAT TCATCTTAAA CATTGCACTT AAAGGAACTT GACTGCTGAT 720
TCATATTTGA GTTAATCTGG TATCAATTAC TGGCTTGGGT TTGGAAAATT CGATGTCTGA 780
GCAGATGAAA TACTTCAATA CCTTAGATAG AGCTGGTTTC TGGATCCAGC CTGCAGTGGC 840
ATGGTCAGAA AAGTTTAAAA TATTTCTGCC AGATTCAAAG ACGAGCAAGA TTAAAAATTC 900
CCAAATGTGT ATCCTGGATC TCCTCCAAAA AACATTCCAT CTTTATTCAT TATTGGATAT 960
TGTCTTGATT AAAATTCCTG TTGGTTTGTC CTTGGTTAAG TAGTAATCTT GTAGCCTAGC 1020
ATTTGGAATG TATTGGGATC ATGTGACACG CGTGAGCCCA AATGAATATA GAGAGATCTC 1080
TTTCACAAGT CAGCAAGGAC GACTAGAACG AGTTCAGATT TCAGCAGCGC AGCTTCAGGC 1140
GGGGGGAGGG GAGGGAGTTA TCTGGTCGGC ACATTCTTTG CCAACATGTG AGTCAGAAAG 1200
AGCTGTTCAA AGCAGGATGA CTTTCCCCGT AACACCAAAG TCCTGAATCC AGGCCGATTT 1260
CTCCAGAGAA CTTGAGATTC TCCCCCTTCT TCCCCCTTTA TCTCTCTGTT CTATTTCTAG 1320
CAGTTGCTAA CTTCACCCAG TAACATGTGA AAAATGCAGT CCACAATGGG AAGCAGATGA 1380
CTAGGCCACC ATCTTCTGAG TCACCCTTCT GTCCTCTGCA TTCCTTTCAA GACTGAGGAC 1440
TGATTCTGAG GAGGGGCTGA GCAGGGAAAT CCAAGGGAAA TTTGGGTCTC TTCAATAACC 1500
CTGAAAGAGA ATGTGTGTAT GTGTGTGTGT GTACGTGTGT CTGTCTGTAT GTGTGTGTCC 1560
ACATGTTTAT GTAGAAGCCA GAGGACAGCC TTAGCTGTCC TCTCCTTCCA GGCACTGTCC 1620
ACCTTTGAGA CTGGGTTTCT TAAGGACCTG TAGCTCTCTG ATTCAGCTAG GCTGGCTGGC 1680
CTGTTTCTGC CTCCCTCGTA TAAGCATCTA CTACCATACT TGGCTTTTTA ACGAGGGTGC 1740
TGGAGATGTA AACAGAGGTC TTGCATGGTA AGTACATCAC TGAAAGAGCC ATCTCCCTAC 1800
CCTCATGCAG ATGCTTTTTT GGTTCCCACA ACCTGCCTGG TACTGATCCC CAGGGACTCC 1860
AGTCTAGGTC CTGATGCTTG TGGAAGATCA AGAAGAAAGG GAGGGAGGCT GTGCAACATT 1920
GGAAGGCCCA GCTGGCCTTT TGTTTTGTTT TATATTAATG GGCACTGGGA CATGAAGTCT 1980
GTCTCAGAGC AGGGAGGGAC AGAATATTGG CGAAGGTCTG AGTCCCCAGA GATGACAAGA 2040
GCTGTCAGCA CCTCTCTTGT GCTGGAAACA TATCCGTCAG CTAGAAAAAG TCATGAGGTG 2100
GAGCTGGAGC CAAGCGTTTT GGGATAGACT CAACTTTAAG GCAAGCTGTC GGGGAGTCAG 2160
TTCAAGGCTG TGTAATCCCC AGTATGGCCG GTAAGAATAC CACGGGGGCC TGGAGGAAAC 2220
TATGCTCCTG CTGGCTCCAG GAACTGGGTC GGGATCCTCA GGAACAAAGC ATCCAGCTGC 2280
AGTGATAGCT GCAAAGAAGC TCAAAGGGGT GTGTATGTGT GTGTGTGTGT GTGTGTGTGT 2340
GTGTGTGCAC ATTTATGAAG GTCAGAGGTC AATGCCAGAC ATCTTCCTCA ATTTCTCTCC 2400
ACCTTATTTG TTGAGATAGG GTCTCACCCT AAACCTGGAG CTCAGAGATT TGTCCAGACT 2460
GGCTGACTGG GAGACCCAGT CATCCTTTGC CTCTGCCTAT CAAGTGCTGG GAGTGTAGGC 2520
AGGTAACTCC AAGCCCAACT TTTCATATGG GCGAGGGGAT CTGAATGCAG CGCCTCACAC 2580
TTGTGTGGCA AGTGTTATCT CATCAGCCTG ACACTTCACA GTATCGTGTG ACCCTGGCCG 2640
CCCAGCTTCT GGGAATCTGG CCTGCTACTT ACAGAAATGA ATGAGTCAGC TCACTTCCCA 2700
TGAGGCCAAG CCTCAGGCAG TCTTCTTGGG TTTAGAGTGA ACTTGCCTTC AGTCTCTCAC 2760
CCACGTGCAG AAACACCAGT CAAACCAGGA TGCTGAGTAG TTAGTTAAAT GGTAGCTATG 2820
AGATGATCAA GGCTCTGTCT GGTTTCTTCA GATCTGTAGG CCCCACACCC AGAATAGTAA 2880
CTGCATATCC ATATTTGAGA TTGAGTAAAT GAATAAATGA ATGAATAATA 2930