EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-16275

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr7:148613980-148615210

Target genes

Number: 14
Name	Ensembl ID

B4galnt4	ENSMUSG00000055629
Phrf1	ENSMUSG00000038611
Irf7	ENSMUSG00000025498
Tmem80	ENSMUSG00000025505
Taldo1	ENSMUSG00000025503
Cend1	ENSMUSG00000060240
Slc25a22	ENSMUSG00000019082
Lrdd	ENSMUSG00000025507
Rplp2	ENSMUSG00000025508
Pnpla2	ENSMUSG00000025509
Efcab4a	ENSMUSG00000048200
Cd151	ENSMUSG00000025510
Polr2l	ENSMUSG00000038489
Tspan4	ENSMUSG00000025511

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr7:148614859-148614876	AGGTCATTTGAAGGTCA	+	8.01
Rarb(var.2)	MA0858.1	chr7:148614859-148614876	AGGTCATTTGAAGGTCA	+	7.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03768

chr7:148613690-148625372

Cerebellum

Enhancer Sequence

ATAACATCCC CAATTCCCTG AATTCTCTAG GAGCTCCAAC TGAGGAACAT CCTTTGGGCC 60
CAATCCCTCC TTTCCCAAGG CCTGGCCTCT ATCAGCTAAT GATAATTCTT GGAGAAGCCC 120
CATCAACTCT TGAGACCAGA GGCCTCAGTT TCCTAACCTA TAATCTAGTC TTGCTTCACA 180
CGCACTGTGT CTATCCTACA GTGGGGGTAG GGAGGCTCTG TTGTAGAAAT ATGATCTAAC 240
CCTGCAAACT GAAAGAGAGA GTATTTGCTC AAAGGAGACA GGCAGGAATC ATGGTGAGCG 300
CTGACAGAGC TAAGTGCTGC ACGCTATCTT GGGAGCTTGT AGCTGTTTTA CAGAATGGGA 360
CGCTGTGGTG CCTTGGTCTC AGTTTGAGGA GCATCTAAGA GGAAGGGAAG GACAGGGAAG 420
GAGCCCAGTC TGGGTTCTCA GACTCTGTCA GAGGGAGAGT GGATCCAGGT CACTAGGAAG 480
TGATAAAATG GAGACAGAGA AGCCATTAGG GAAGTTGCTA GCCAGTGCTT CTTCTGGTCA 540
GCCATCTGCC CCACCCAGCT TAGATCCAGT GCCCTTTCCC CAGTACAGGC CACAGCTTTA 600
TCCAACTCAA GGGCAAGAGT TCCTCGCTGG GATCAAGGCT GTGCTACAGG AGCAAAGAGG 660
GTCCCTGACA GCATTGCCTG GGGGTACTGC AGAGTAAAGA CCTCACCTTG AGTCTCTGCA 720
TCCTAGCTGG GGAGACTGGG GCCCGGCCAC CCTGCTGCAC AGAGGCTTCT GTCTGGAAGA 780
CCTAGGGCCA CCTGTCTACC TCCCACCCTG GGAGGACAAA TGGCCTCTGT GCAGAAGCTC 840
AAGCTCCAAG CCCCCCACCA GGCACAGCGG ATACACTGAA GGTCATTTGA AGGTCACACC 900
GTGATGTAGA TAACCAGTGC AGAAACCCAG GTACTGCCCA CCTCCCAGGA AGCTCCTCCA 960
CGCTACATTT CTGGAAAGGC CTTAGCCATT GAACATCAAG TTTACACAGA GCAGTTAACT 1020
GCCCTGGGTT ATTTTCTGCT TAACTTACAT CCTATTCTTC CAACTGCCTC CTCTGCCTCC 1080
CCAGGGCTGC TAAGCCCAGG GGAGTAAGGA GCTCACGCCA CAACCCCAGT GACCTTCAAG 1140
GCCAATGCAC TACTGCTTGG CCACAAGACC CGGCGCCCCC AATTCCACCC TACCTCCCCG 1200
TCCTGGCACG CCCTCGGAAG GGCCTGTAGC 1230