EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-10566

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr2:155601370-155602460

Target genes

Number: 14
Name	Ensembl ID

RP23	ENSMUSG00000093687
Gss	ENSMUSG00000027610
Trpc4ap	ENSMUSG00000038324
Edem2	ENSMUSG00000038312
Procr	ENSMUSG00000027611
Mmp24	ENSMUSG00000027612
BC029722	ENSMUSG00000074649
Eif6	ENSMUSG00000027613
Fam83c	ENSMUSG00000074647
Gm15557	ENSMUSG00000078972
Gdf5	ENSMUSG00000038259
Cep250	ENSMUSG00000038241
Ergic3	ENSMUSG00000005881
Spag4	ENSMUSG00000038180

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr2:155601501-155601522	TTCAGCACCGCGGACAGAGGC	+	8.88
ZNF263	MA0528.1	chr2:155601689-155601710	GAGGGAAGAGGGCGAGGAAGG	+	6.23
ZNF263	MA0528.1	chr2:155601673-155601694	GGAGCTGGAGAAGGGGGAGGG	+	6.64
ZNF263	MA0528.1	chr2:155601679-155601700	GGAGAAGGGGGAGGGAAGAGG	+	6.65
Zfx	MA0146.2	chr2:155601393-155601407	GAGGCCGGGGCCGG	-	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03687

chr2:155599075-155602337

Cerebellum

Enhancer Sequence

CAGGTGGGCA GGCGCGCGGG GTCGAGGCCG GGGCCGGGGC TGGGCAGGGG GCGGCACCGA 60
CCGGGCCTGG TTCGGGGTGC CTGGCGCCGG GTCAGCGCGA GGGCCGGGCG GGGCCCGCGG 120
GCCGGGCTCC GTTCAGCACC GCGGACAGAG GCAGCGGGCG GGGGCGGAGC GGAGGGTCGA 180
GGTGGCCGCG GTGACGGTGG GGCGTGTGGC CTGCAAGGCT GTGTGTGAGG GAAACCGTAC 240
GCCTCGGAGT AAATAGTAAG CGCAGCCAGT GTGTTGTGGG CTGGAGGAGA AGCCGAGGAT 300
GTTGGAGCTG GAGAAGGGGG AGGGAAGAGG GCGAGGAAGG ACCGGATCGC GGTCTTGGTA 360
GCTGAAGGGC CGTCGGGATA GGCGAGATCA GCGTGGCCCC ACCGGGCAGA GCTGAGGCCA 420
ACGGACCGTG GGGGGTGGGG GATTACAAGA AGGCACATTT CGGCCCAAGG CAGGAAGTTT 480
TTAACAATTG GAGGTGCTCA GCCAGCCCAG GAGGCGGTGA GCTGCTCATC ACTGGCATGT 540
GCAAGTAGGA GCTCCAAGAG GGGATTGGAT GGATGCATGC ATAATGCCTG CATGGATACA 600
TGCATAATAA CAACCGTGCA CTATGGGCCA GACTTGGCGC TATGTTTGAT AGGAATTAGC 660
TTATTTAACC CCAGCATGTA TCCTGTGAGC TTGTTGTAGC ACCTGTCCCC ATTTTACAGA 720
TGAGGATAGA GACCCTGAGA GCTTAAGCAA TTCGCTCAAG GTCACAGAGC TAGTGGTTTG 780
ACTCTAGTCT GTTTCATGTT TAAGCCAGGA CATTATGTCG TATAAGGTCC GGGACAGTTG 840
TACTAATTTT GTTGCTGTCT CCCAGCCTAG AAGCCTGCAA TTCTAAAAAA AAAAAAAAAA 900
AATAATGTTG AACCAGTGTT AACGTTGCTG GAGGAAATTG GTGATTGCCT GAATTATCCC 960
GAGAGAAGTG TGTTTGTTAA GTAGACAGGC TGTTTAGAAG AATCTGCCAG AACAGCAGTT 1020
TTTAACTGGG CAAGGGACTC AAGGGATCAT AAATTCTCTG AAATTTTCTG CTAATTTGTG 1080
TTTATATGTG 1090