EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-08787

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr19:4474720-4476930

Target genes

Number: 10
Name	Ensembl ID

Coro1b	ENSMUSG00000024835
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Rhod	ENSMUSG00000041845
2010003K11Rik	ENSMUSG00000042041
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Ctsf	ENSMUSG00000083282

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr19:4475943-4475956	AAGGTGTGAAAAG	+	7.12
PKNOX1	MA0782.1	chr19:4475791-4475803	TGACAGCTGACA	+	6.04
RREB1	MA0073.1	chr19:4476105-4476125	GGGGGTGGGGTGGGGTGAGG	-	6.1
RREB1	MA0073.1	chr19:4476100-4476120	GGATTGGGGGTGGGGTGGGG	-	7.34
TBR1	MA0802.1	chr19:4475944-4475954	AGGTGTGAAA	+	6.02
TBX21	MA0690.1	chr19:4475943-4475953	AAGGTGTGAA	+	6.02
TBX2	MA0688.1	chr19:4475943-4475954	AAGGTGTGAAA	+	6.62
TGIF1	MA0796.1	chr19:4475791-4475803	TGACAGCTGACA	+	6.27
TGIF2	MA0797.1	chr19:4475791-4475803	TGACAGCTGACA	+	6.37

Enhancer Sequence

TAAATGGGCC CAAAGTTGCC CAGCCACCAC ATAGGGAGCT GACAATATCC CAGGTCTGCC 60
TGCAGCACGT GCCCTTGTTA ATGGCTTTAT TCACAACCTG AGAGACCCTT GGCTCCATCT 120
CTCCCCAGGC AACACCAGTG AGTTCCTATC GCCGCCCAGA GGTTGCAACT TTGGCTAGGG 180
CTAGGATGCT GACAAGGCAT TTGAAGGCCA GGGCAGCCAG TGGCCAGAGC TGGCACTTCT 240
GAATCACAGC AGGGGCCAGC TGGGGTTGCT CCAGATCTTC ATCTGAGCTC AAACTGTGCA 300
TCTTCCCCCT TAAGCATCCC TCTTTATCCC ACCCTACAGT CAGCCCCAGG GTCTACACTG 360
CATGGAGCAG TGTTCATTGA GGAACAGCCC CTGCTTCACA GTTGTGCTTA ATAGGATCCT 420
CCTACCTCCC TCCCCAGCAC TACCTCCACA TGTGCTGAGT GCTTAACTAC AAGCCTCATG 480
CATAATTGGT GCCCACCAGA CCTGGTGACT GAATAAATTA CTGGATCCCC ATTTTATAGA 540
CGAGGAAGAT GGGGGCCACA CACATCCCAA CATCGAAACT CTGGGCTTCA TATTAGTGAA 600
AGATGGTGGC TCTGGGCCAC CATGCTGACG GCTGACCAGG CCCCGCAGGT CACTGGGAAG 660
GTTGGAAGCA TTGTGCTGGA ATCGGACCAT GGCAGAGGCT CCCGCACCTC CTGAGCTTGT 720
CAGAGAAATG CCTTTCAAGG AATTCTGTGT GTAGAACCAG GGACCCTGAG CCAAGTCCCT 780
TCTCTGCACT TTACCCGCTG TTTCTTGCTC AGTGTCCCTG CATGCCCAGC AAGGTGGTGA 840
CTCCCTTTAT CTCTACCTTG GCATCGGCAG GTAATAAGGA TGGGGAAGAG CTTTCGGGGG 900
AGCTTCTGTC TTCTAGGCTG TGAGTTTCTT CAGGGACCTT TAGGCTTGAC AAAGCTTTGC 960
AAGTGAGTAA GAGCATCTCT CCCCCACAAC ACTTTCCGGA TGGATAACCA CATCCTGGTG 1020
CCATCCCCCA GACACCCGCA GGAACCACAG TGCAGACTGG CTGGGGGTGG GTGACAGCTG 1080
ACACTGGGCA CCTACTATGT GCCAGCATAG TATCAGGGGG GACTTGCCTT GTGCTCAGGA 1140
AATGCCCCCA GAGAGTCCAG GGTTCCCTGT CAGCCCTGGA AATGTAGGGA GGGGTGGCCT 1200
AGCAGCTGAG ACTCCAGCCC TTCAAGGTGT GAAAAGTGAC TTGCCCCATC CAAGTCACTA 1260
GCAAGCACTT AGTAGGATGA AGCCAGGTTT GGACCCCAGG CTGGGAGGTC CCACTCTTCT 1320
GGGCTGCTTG AGAAAGATTT CACATTGCTC AGAGAGGACT GGAAATGGGG GTTGGGGTTG 1380
GGATTGGGGG TGGGGTGGGG TGAGGTGAGT GTATAATTGT AATTGTCCTG GCCTTACTGG 1440
GTGCATTGTT AACACCTAGG TGGGTTTCCT TCCCTTGCCT TTCTTAGTTT CTAATAAGGA 1500
CTACTTCTGA GGCTCTGCAA ACTCTGCACC CTGGCTAAAC AGCTCAGGTG CTTGTTTCCC 1560
AGGTTCTTCT CAACGGATTT GTCCCCATCA ACTGTAAGGC GAGACAGTCT TTTAGCAGCA 1620
CCATGCCCAC CAAAGAGAAA GGCTCAGGGC TCCTTCACCT ACAATGCCGT TTACTGCCCC 1680
CATGTTCAGC TCCCGTCTAT ACACAGCTTC GAGTGAAGCT CAAGGAACCC TTAGGTTCTT 1740
CCCGTAGGCC TCCTGGAGAA GAGATGCGAC GCGCCCCCTA CGATGCAGAT CCTCATACCC 1800
TCACACCACA CTGGAATTTT GGGAGGGGGC ACTGGCCAGG GACCCCCAAC GGGATGTAAG 1860
GTCAGGGGCA GTTAGGACAG CCAAGGTGTT GAGTGTGAAG GTGAGGGGTG TGTGCGGTGT 1920
GCGAGCTCAG GGGAGGTGTG TAAACAGCCG GGTGAACCGC GTGTGTGCAC ATGGGGGCCG 1980
GGCGAGCTGG CGCCAGGCGA TGCGCAGTGC GCGGAGTGGC TGGGCCGGGG AAGGGCGCCG 2040
GGCGTGCTCT GTGCCCCGCG TTGGTGTGCC AGCGCAGCGC GGGGGTGCAG ACGTACGGAG 2100
TGTGAGGGGC CCCGGGTTTC GGGCTTAAGA AGAGGGACTG AGTGCGTCCG CCCGTCCATG 2160
CCCAGGGCGC TTGTGCCTGC CGCGCTCTGT GTGGGGGCCA GGGTGCCTAC 2210