EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-08433

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr18:37973400-37974730

Target genes

Number: 7
Name	Ensembl ID

Pcdhb16	ENSMUSG00000047910
Pcdhb20	ENSMUSG00000046191
Diap1	ENSMUSG00000024456
Hdac3	ENSMUSG00000024454
Rell2	ENSMUSG00000044024
Fchsd1	ENSMUSG00000038524
Arap3	ENSMUSG00000024451

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1	MA0002.2	chr18:37973712-37973723	GTTTGTGGTTT	+	6.02
ZNF263	MA0528.1	chr18:37973583-37973604	TCCTCCCCCACCCCCTCCCCA	-	7.08

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10743

chr18:37973713-37977847

Olfactory_bulb

Enhancer Sequence

CACACAAGAT GCCATCAGTA TTTTTCTTGT TTTGGCGGTT ACTCTGGCAG CCATACAAGA 60
AATGGATGAG ATCATTGGGA GATGCACAGA GGCAGTGCAG ATTGGAGGAA ATGGCTGCAT 120
AGGGTCTCCA GGCTTGTTGG TTGATCTAAG AAACAGGGAT GGGAAAACAT TAAAGGCGGG 180
AACTCCTCCC CCACCCCCTC CCCACCCCAC ACCTAGGCAA CTGAGGTCAT GGGTTCTGTC 240
AGCAACACTT GGTAGAGCAG GCTGAGTCCT CACCACTGTT CCCATGGTGG AGGTATATAT 300
GTCAGCTTTG TTGTTTGTGG TTTTGTATTT TTGGTGGAGG AGCTTGTTTT GCCTTTACAT 360
AAGAACACAG AATTGTCACA TCTCTCCCTA TGAGAGTTTC ATGTTGGGTG CTGACCTCAG 420
CACAGTGAAA GAAAAAAAAA AAAACATAAG GACAAGAACA CTTGATCTGC TTCTGGTTTT 480
GGTAGCTGTT GGTAATCTAG GCAAGGATTT GGATGAATTA CCATAGCTCA CACTTAGCTC 540
TGTCTGAGAT TTTCTTTCGC TGTGTGTTTA CTGTCAGAGG TACAGCTTTC AGGCACCTAT 600
GGTGCAAAGC ATGCGCTGTT CCTGCGCTTG GGCAAGTTAG TAGGCAGGCT GCTAAGAGGT 660
CTGAATGAGG GGTGGGGGTG GGGTGAGATT AAGTCCGCAG CTACAAGAGG TCCCCTGGGG 720
CTAAGTGAAA GGCTTGTTCT TTTGAAATGG TCCCTGTTGG TAATTAACAA CAAATCATGA 780
ATACTATGGT GTCAGATGAA GAGGATTTGA AGGCACTACG TTGGTGGAGC TGATCCGTAT 840
CATTCAAGAA GGCTGTTCAG TCTTTGAACG CTAGCAGTCT GCCAGGTAAT GCGAGCTAGT 900
CCTGAGGAAA ACCCCGAGAC TGATTCGCAC AGTTTTGGAC TGGCTCCCAA TTCCCGTTTC 960
CGCCACCTAC TTCATACTGT CCTTGAGATC AACGAATGGT AGCTTCCTGT TGTAGCAAAT 1020
ATTTGAATAA GAGGTTTGGT TTCTGCTGTG CCTTCTGTTA CAATAAAAAA CGTGTGCTGT 1080
ATAAATTTAG TTGGCTTCAT TAATGTGTAC GCCTTCTCTG CAAAGAGAGG TAATCTGGGG 1140
AGGAGCAGAA TGGTGAGAAT ATGCAGCGCT TCTTATAGGC TGTTGCTTTA ATACGACCAG 1200
CCTGAGATGG GAGCTACTCA TTTAGAATAT TGGTCGGTGA CAACACTGGC TGGAACAAAG 1260
TGACCAGTCT CAGATAGCCA CTAGCTTTCC TGGGCTTCAG GTTGCTAGGG CTCAGGAGGT 1320
AGCTGTTTTC 1330