EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-06233

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr15:79762340-79762870

Target genes

Number: 13
Name	Ensembl ID

Cby1	ENSMUSG00000022428
Tomm22	ENSMUSG00000022427
Sun2	ENSMUSG00000042524
Dnalc4	ENSMUSG00000022420
Nptxr	ENSMUSG00000022421
Cbx6	ENSMUSG00000089715
Apobec3	ENSMUSG00000009585
Cbx7	ENSMUSG00000053411
Pdgfb	ENSMUSG00000000489
Rpl3	ENSMUSG00000060036
Syngr1	ENSMUSG00000022415
Mgat3	ENSMUSG00000042428
Atf4	ENSMUSG00000042406

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr15:79762412-79762427	GAAGGTCAAAGTCCA	+	6.92
Hnf4a	MA0114.3	chr15:79762413-79762429	AAGGTCAAAGTCCAAT	+	8.45
SP2	MA0516.2	chr15:79762808-79762825	GAGTGGGCGGTGCTGAG	-	6
ZNF263	MA0528.1	chr15:79762347-79762368	GAAGGTTGGGGGAGGGGAGGA	+	6.28
ZNF263	MA0528.1	chr15:79762354-79762375	GGGGGAGGGGAGGAATGGGAG	+	6.61

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10157

chr15:79757097-79766667

Embryonic_stem_cells

Enhancer Sequence

CCGGCTGGAA GGTTGGGGGA GGGGAGGAAT GGGAGCGGAG AAGAAAGGTG TGCCCTGGGG 60
GGTTGGGATC GGGAAGGTCA AAGTCCAATA AGAAAACTTC AGAGGCCACA GGAGACTTTC 120
CTAAAGCTCT GCGGCCAACT TCAAAGGACT TGGTACTAAA TATCCAGAGA GCCGAGTTCG 180
AGACTCACTT TGACTCTAAC GCACTGGCAA GTTGCTTCAT CAACTTGAGC TTTAGTCTCC 240
TCGAAAGTGA GCGTAAAGGG AACGAGACGG AATAGAACTC AGGATCTCTA GTCCTATCTT 300
CATCTCCATC CCAGGTGGCC TCGGATGCAC CAACATCCGA GGGCAACAAC TTTAACTCTA 360
CTGGCCCTAC ATAGTGGTGG GGAAAGTGAG GAACAGGATG TGGAGACCCG CCAGGCAGCC 420
CAGGGTCCCC AGGTCACCCC TGCACCACTT TCTGCTCTGC CCAACCTGGA GTGGGCGGTG 480
CTGAGGAGCG GGAGGCAACC TCGCCCTGTC CCGGGAGCCG CCCCCGAGCA 530