EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-03192

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr11:100478950-100480840

Target genes

Number: 15
Name	Ensembl ID

Eif1	ENSMUSG00000035530
Hap1	ENSMUSG00000006930
Gm10039	ENSMUSG00000091478
Leprel4	ENSMUSG00000006931
Fkbp10	ENSMUSG00000001555
Nt5c3l	ENSMUSG00000017176
Klhl11	ENSMUSG00000048732
Ttc25	ENSMUSG00000006784
Cnp	ENSMUSG00000006782
Dnajc7	ENSMUSG00000014195
Zfp385c	ENSMUSG00000014198
Kat2a	ENSMUSG00000020918
Hspb9	ENSMUSG00000017832
Ghdc	ENSMUSG00000017747
Stat5b	ENSMUSG00000020919

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MSC	MA0665.1	chr11:100480160-100480170	AACAGCTGTT	+	6.02
MSC	MA0665.1	chr11:100480160-100480170	AACAGCTGTT	-	6.02
MYF6	MA0667.1	chr11:100480160-100480170	AACAGCTGTT	+	6.02
MYF6	MA0667.1	chr11:100480160-100480170	AACAGCTGTT	-	6.02
RREB1	MA0073.1	chr11:100480001-100480021	ACCCCACCCCACCCCACCCC	+	6.22
RREB1	MA0073.1	chr11:100479996-100480016	CCCCCACCCCACCCCACCCC	+	6.74
RREB1	MA0073.1	chr11:100480002-100480022	CCCCACCCCACCCCACCCCG	+	7.29
RREB1	MA0073.1	chr11:100479997-100480017	CCCCACCCCACCCCACCCCA	+	7.67
SP2	MA0516.2	chr11:100479962-100479979	ACAAGTCCCGCCCGCTC	+	6.54

Enhancer Sequence

CTGCCTAGCC TAAAACTGTG GATATCTGGC TGCCCTTGAC CTTGTCCGAT TGCCGCTGCC 60
TCCAAGTGCT GGATTATGGT GAGCACCACG TCTAGCTTCT TTTTATAAAA CCCAGACTGA 120
TGAATTCCAG CTCTTTCTGC CTTTGACTCC CAAGTGCAAG GATTACAGAT GTGTGCTACC 180
ATACTCAGCC TTTGTTTAAT ATATCTGTCC ATAAACATTT ATGACCATTT ATGACAAAAT 240
ACCCTCTAAA GCTAATCTGG TCTTTTAAGG AGGAGTTGCT TTAGAGAGGG GACACAGAAG 300
TTAGCCTAGT GTAACCGGTG CACACCTTTA GTCCAGCACT TGGGAGGCAG AGGCAGATGA 360
ACGGTTCTCT ATGAGTTCAA GACTGGCTGG TCTACATAGA GACCTGTTTC AAGTCCGAAT 420
CAGTGACACT CTCTACAGGA GATTTACACT TGAGTAGGAT AGATTCCTCA AATGACATAT 480
AGCCAAAGTC CCTATTTATA GCAGTAAGAA GCACTAAATT CTTTCCAAAT ATAAGTAAAA 540
TAAAATGTAA GCTCTGTTTG TGTTAGCGAG GGGCTTCCGT TCTCATTTGG CAATACCTTA 600
AGTTATATAG GAGCGGATGA TGCTTAACTC CAGACACTGT AATGACATGG AAACTCAAAC 660
AGGAGGAGGA GGAGGCAAGG CTAAACTTGA TAGCTCTTGA TCAACTACAC TTTGTCTAGC 720
ATCTCAGCTT TCAAGTCAGG TACTACCATA CACCTGATGA CTACAATATT CCCCGTATCT 780
CTCCGAGTAC CGCTTATAAG TCTAACTTGG ACAGTAAACC CCTCAGAATC CTGATTTCTA 840
GACCTCCTGA ACTGACTCTG TTCAAATTAT TCAGCCTGAA GACATTCCCT ACAGGCTTGG 900
TATGAACATG AACCACAAGG GAAGGAGAGT AAGGGGACTG TAGTCCATCC TAAGAAAAGG 960
ATCAAATTAA TCATGCTACT GATAAAAGAA TCAGTTCACC TTTGGTATCA GAACAAGTCC 1020
CGCCCGCTCC CAAGCGTACT CTAACCCCCC CACCCCACCC CACCCCACCC CGCTTTGAAA 1080
ACCCGTTCTT AAGCTGGTGT CGGAATTCAC CAAGTGTTCG AGAAAAACCA CTCACTCAGC 1140
ACCTCCCTAG GCTAGGCCAG ACTAGCAATC CCGAGCCACT GCAGCTGCCC AGCAGTGCCA 1200
ACTGCATTTA AACAGCTGTT CTCCTTGAGC TTAAGAATGC TCTTGGGAGG AATGGCGAAG 1260
AAGCGTCTGC CCCCGTACTG CAAGAGACAA GCTCCTCATT CGCCCTTCTG TCTATCCATT 1320
CTTAACTTCT ACGGCTATCG GGGAGTGGGG GGCGACCAGG TCCATACAGT GAGCATCCAA 1380
TTCTCTCAGC CTCACACTAG AGACCACTAA GGGTCATTAG TGAGGAAAGG GAAGTGAGGA 1440
GGAGAATGCG GGCTTCGGAG ACGACCAGTC AGGACGGGCA ACAATGCACA CAAGTTAACC 1500
AGAGCGGGCG GAGGTCGGGG CTCTGTTAAG GAAGTCGTCA TTGTCGCCGC GACGCCTCCC 1560
CCACTCTGCA GCCGACCTCT GGGGTTCCTA CCCTTCCCCC CGCCCCCGCC CGGGAACCCG 1620
GCCTCCACGA TGAAGTCCAC CTTCCTCCCC GCGGCAGAAC AAGACCATGC CTCAAGCTCC 1680
CTGCTAGGCG GAAGCAGAAG GGGACAGCAG ACCCCCTAAG TGTACCCCTT CAGAGGGATC 1740
TCGGTCGACT CCAGCTCAGA TGGGGGCGGG GGGTGTCTGC AGGAGAGCCA TCGTCTCTGC 1800
ATCTGGGGGC TGCCTCGCTG GCGGGTCCAC CTGCCCCAAG CCACGAGCTG CAAGCTCGTC 1860
TCCTCCATGA CTCTACCACC CGGTTGGTTA 1890