EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM115-00003

Organism

Mus musculus

Tissue/cell

Neuron_cortical

Coordinate

chr1:3658810-3660630

Target genes

Number: 1
Name	Ensembl ID

Xkr4	ENSMUSG00000051951

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:3659500-3659512	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:3659504-3659516	AAACAAACAAAC	-	6.32
Foxj3	MA0851.1	chr1:3659513-3659530	AACAAATAAACAAACAA	+	6.12
MAX	MA0058.3	chr1:3658857-3658867	ACCACGTGCT	+	6.02
Spz1	MA0111.1	chr1:3659642-3659653	AGGGTAACAGC	+	6.62

Enhancer Sequence

AATAAATGTT ACAATTAAAA TGACTTCTTC AGTACACTGA GTTTAACACC ACGTGCTTTT 60
CAGAAAATGT CAATCTGTAG GAGGCACACA CAGGTGTTTA GTGACAATAA CTAATAAGCA 120
CTTATATTGC TGATTTACAG ATAATTAAAA GGAAGTGATT TCAGAATATT TTATAGTTTT 180
CACAAGTTAC CAAATAGGTT GATAAGTTTT TGGTACCACA CTGCTAGATT AAAACTACTA 240
ATCCTGTATA TTGTAGCCAC TAAATAACTT CAGTACTTAA ATAACCCTTC TAGTTCTTCC 300
TCATAATTAA AGAATACCCA ACTTGGACCT TCCAATACTT TTCTGTAGGA AATTGAGACG 360
CCACAGTTAA ACTGATGTTT TAGAAAGTCT CCCAGGGTCT GAAATATATA TGTTTCCACA 420
TCAATTTGTC TAACAGTACA CCATGCCTCT TTACCAGAAA GTATCTTCTC TAAATACGTT 480
CTAAGGCAGG AGGTCTAGGG CCATGCTCAC CCTGCTTTAC AGCTCTTGGT TCTAGGAAGA 540
GCAATGGGAT GACTACAGTT ACTCTCCTCA GACAAGGACG CTGACTTCTG CCAGAAAGAG 600
AAGTGTGTGA ATCTATGTTA CAAATGCTCT GAGCTGTTTC TTCATGGGAT ACTTCATCAT 660
GCCAATGGGT TAGAATGTCT TTCATCATTA AAACAAACAA ACAAACAAAT AAACAAACAA 720
AAAGCATACA GGTGAAAGTA CAGAGTACAT GCCAGTATCA GCCCACTTGG TAGGAAGTTT 780
CCACACATTA CACTACATAG TTACTAAATT GCTTTAAAGC CAAGGAGTCT CTAGGGTAAC 840
AGCCTCTATA TTTTTCTAAA CATATATGTT TAATGTGTTA AACATTGTGT TCCAAAGCTT 900
CTAAACACAG AGAAGTCAAA AGAACAGATT TCTGAGCATA TTGTCCCACC ACATTCCTAC 960
ATCTGTGCAG TAATGCCTGA GTGATGGCTC CACCCTGCCC AACAAGTTAA GTCTTGCACT 1020
TCAGTGTATA AGCAAAGTGA CAACTATGTA AAGAGACTTG GTGGATCAAG TGAGAAGCAG 1080
TAAATCAGCC AATGAAAATG CACAATTAAA GTTTGCCCAA TGTGCTTGCT ACCCCTTTTC 1140
TAAAGGTTCC CAGTTACATG TGAAAGTCAA ACTAGGGATG CTGCCAGGTA ATCAGAGGAG 1200
CACTATATAA GTCAGAGTCT GAGCACTTAT GCACACACAC TCACACACAA CATAAATGAT 1260
AAATGTTCAC TCATTTTACA TATATATGTC TGTATATATA TATGTATACA TATACGTCAA 1320
ATATTTATTA ACACTACTTT AAGCTCAGTA TTTCTTTAGC TGTTATCATC CAAATATGGA 1380
CATCTTTGAG CAGTAACAAG TCCTATTTAA CTAGAATTGT AATCCTATCC AAACCCAGCA 1440
CAAAGGAAAC CATCAAAAGT ACAACACACC AAGAATTCTA CATAATATAA ATGACTTTTT 1500
AGTAAGTGTG AGAGGAATCC TCTGCTAGTG AAATATTAAG TCTACAATCG GGGGAGAACT 1560
TGTAGCATAC ATAGAAAAAC TAGTCTATGA GAAGATGGGA AACGTGACAG ACTACAAACA 1620
CGTTCCTGCG TGCCCTTCCT TGGTTTCTTT TTCCTCACCT AACATGAGTT AGGTAAGGAG 1680
CAGTTTAGAA AAGAAAACCA CAAGAGTGAC TTGGCTTACT AGTCATTAGG AAAGATTTCA 1740
TGCAAAAGTA GAACAGTGGA CATGGTGGGC AGGCATGTAG GAACAGTAGT AGTCTCTCTC 1800
AACCCCCACC CTGATACAGT 1820