EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM113-01053

Organism

Mus musculus

Tissue/cell

Neural_tube_embryo

Coordinate

chr1:137208570-137210270

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr1:137209267-137209278	AATGTATCAAA	+	6.02
FOXK1	MA0852.2	chr1:137209606-137209620	CTCTTGTTTACACC	-	6.07
Foxo1	MA0480.1	chr1:137209607-137209618	TCTTGTTTACA	+	6.02
MEF2A	MA0052.3	chr1:137208913-137208925	TCTATTTATAGA	-	6.74
MEF2D	MA0773.1	chr1:137208913-137208925	TCTATTTATAGA	-	6.44
Nkx3-2	MA0122.3	chr1:137209647-137209660	ATAAACACTTAAT	+	6.48
Nr5a2	MA0505.1	chr1:137208595-137208610	GCTGGCCTTGAACTC	-	8.25

Enhancer Sequence

TCCTGGAACT CACTCTGTAG ACCAGGCTGG CCTTGAACTC AGAAATCCGC CTGCCTCTGC 60
CTCCCAAGTG CTGGGATTAA AGGCGTGCGC CACCACCGCC CGGCAACAGT ATGCTTTTAA 120
ACTTGCCATT ATTGCTCACT AGAATCTAAA TAATGACTAA TTTCCCTTTA GAATTCATAA 180
TCTTCTAACT TGATAAAAAG ACTGGGACTA TCTCCTCTGT ATTTTACAAA TGAACGAAGG 240
CTCACACAGA AGTTAAGTAG CCTGCCCCAG ATGGAATAAA TAACTAGAAC AGCCAACTTA 300
AGCACAAAAG TTGGTACTCC AACCCCCCGC AAACTCTGTC CACTCTATTT ATAGATCCTA 360
AAGCACTCCG AGAAAGCAAC AAAGAAGTAT TATGACAATG ATTAAACCAT CTACTGTTTC 420
AGACAGCGCT GGCCTCAGAA CACACCAAGA AAAAAAAGGA ATGTCCAGTA ACTTATCAAA 480
CATCAAGACA TGGCCTTGCT ATGTATCCTG GGCTAGCCTA GAACCTAAGT GCTGAGATTA 540
CCAGCATGCA CAGTGCACTC TGATGAAAAT ATGTCTGACA CAAGGTCTAA CCCCAGCTGC 600
CCTAGAACTT GCTATGGAGC CCAGGCTGTC CTTAAACTTG CTGGCTCTCC TGCTTCTACC 660
TCATGAGGCC TGTGCCACCT GACCTGGGGA AAACTCAAAT GTATCAAAAT TACCCCTCCT 720
GCTAATCTGT GTCATTATAC GGCATCTAGT ACCAATTTAT ACAGTCCAGC TAAACCCTGC 780
ATATCCAACC CCAACACATG GAGATAACCT CCTCTGAGGA CAGAAGGCTG AAGCATACTT 840
TTGGGAGTGC CACCAAATAA TAATTTAAAA TCCTGGGCAG ACACACTATT TGAGGATAAT 900
ACCCTGACGC TCATTACAAA CAAAAACCCA GAATACCAAG ATCTATTAGC TTGTGACACC 960
TGAGGCTTTA TTCAAACAAC TGTTGAGACT CGACAGCTAT TACATTAATT TACTGCAAAC 1020
AGCTATGCCT GATTTACTCT TGTTTACACC TTGAGCCAAG CATACAGCCC TTACTTAATA 1080
AACACTTAAT GAATTTATGT CTATTCATGG CTTTTCAGAG AACACACGCA GCTCATCTCT 1140
TCCTATTTTC CACATACTGA TATATCTTTT TTCTTCGGGA ATTCCACATA GGAAAGGCCG 1200
CTTCAGCCTA CAAGGAGCTC ATCCAGCCCC CTTGGATGTT GGGTGAAATT TGTGGTCTAC 1260
TCATTTGAAA TGCTTCATCG TGGGGACACT TAGTCCTCAT AGGCATAAGG CCTCGGGTAT 1320
GGCACTCGGA GATCTACATT CCCTTCGTCG AGGCAGAAAC TGAGCAGAGC GAGGCTTAGG 1380
GACGTGTTCA AGGTCGCCTC AGCAGGCAGA AGGGATCATT ATTGTCCCCG CACAAAGTCG 1440
ACAGCACCTG CCATAGGGAG GAGGTTCCAA AGCTCCACCA AGCCCAGCAC CGGACCTCCT 1500
CCCAATGCAC CACAAGGTCA CAGGGGTGCT GGGGTCCTGG CACACTGCGC TAAAAAGCCA 1560
CCTTTGTCAC GCTCATCCAC ACTACCCACA GCTGCCCAGA TCTCGGCGCC GAGCCGCGCG 1620
GAGCTCCGCT TGCACCTCAG ACTCCGACCA CGGCGGATGG AGGAGGTAAT TAAGGGACAA 1680
GGGCGGCGGC GGCAACTCAC 1700