EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM113-00590

Organism

Mus musculus

Tissue/cell

Neural_tube_embryo

Coordinate

chr1:78139290-78141920

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr1:78141036-78141047	AATGTATCAAA	+	6.02
EWSR1-FLI1	MA0149.1	chr1:78140502-78140520	CTTTCCTAGCATCCTTCC	-	6.11
FOXF2	MA0030.1	chr1:78141476-78141490	TACACGTAAACAAT	+	6.32
Foxq1	MA0040.1	chr1:78140623-78140634	CATTGTTTATT	+	6.02
POU4F1	MA0790.1	chr1:78140461-78140475	ATGAATAATTTATG	+	7.38
POU4F3	MA0791.1	chr1:78140461-78140477	ATGAATAATTTATGGA	+	6.67
TFAP2A(var.2)	MA0810.1	chr1:78140562-78140574	TGCCCTGGGGCA	+	6.14
TFAP2A(var.2)	MA0810.1	chr1:78140562-78140574	TGCCCTGGGGCA	-	6.92
TFAP2B	MA0811.1	chr1:78140562-78140574	TGCCCTGGGGCA	+	6.37
TFAP2B	MA0811.1	chr1:78140562-78140574	TGCCCTGGGGCA	-	7.22
TFAP2C	MA0524.2	chr1:78140562-78140574	TGCCCTGGGGCA	+	6.44
TFAP2C	MA0524.2	chr1:78140562-78140574	TGCCCTGGGGCA	-	7.22

Enhancer Sequence

TTGGCTGTTG TTTTTGTTAC TGTGGCTGAA TTGAAACCAT ATTTTTTTTT TCTGGACCAA 60
GCGGGTTCAT TCCTTGCCAC ATAAGACAAG TTACCTCGGA AGCCATAGGC CACCGTTAAC 120
TGGTGAACTA GAGGCAGAGA ACAGATCTCA AAACCCTTTC TGGGATTGTT TCTTCACCAA 180
GTTGGGCAAA CTGGCTTGTT GGTATCAGGT CCTACCCTGC CAGACTCACA GCCAGCTCCT 240
CTGCGTGCAT CTTTCTGTCA TCACCAAGCT ACAGATGAGA AAACAAGGAG GTCCAGAGGG 300
AAAAACCAAG GCTACCCTAA CAGAAGACCC TCTTTACCCT ATCGTTTGAG GCGGGAAGGA 360
TTACAGAGAA GACTGTGGTC AAGGTTGCTA TTTCTCTCCC TTTCTGGTCT TGACTCCAAA 420
ATTAGTCAAC CCTAAAAATC AATTGTGAAA ACATGGACGG GAAAGGTGAG GGGTGAGCTC 480
CGTGGGGGTT GGCGTGTGTG TGTGTGTGTG TGTGTTTGTG TGTGTGTACT GTGCTAAGTG 540
CAGTTACTAA GAAAGGACTC TGACTATGAA AATTAAGCCT AAGTTATGTT TATAGAACTT 600
AAAATAAGAC ACAGTCCGTT CAATAAGGCC AAGGGCAAAC AAGAGCCTGG CCTACATTCA 660
TATTTTCCAC TATCAAATGC TTTTGCCGTT GTGTACATAA ACTGCTTCAA AGCCAACAAG 720
TAAACGAAGG CTCAATAAGA TATAGACTAG GTAACAAGTT ACACAGAGAA CCTTTCAGGG 780
GGTAGAAAAC AAAAGAATGC TTTGGCCAAC CCTTATTAAG ACAAGACTAC CCAAAGGCAC 840
ACAAAACCCC ACAGCCTGAT CCACACGTAA GCTTGGCCAG GATTAGCATG ACACAAGATG 900
TTTGGAAACT AGAAGAAAGA CAGACTTAAG AAGAAAGTTA AATACGACTC CAGCTTTGTG 960
GGACGGGGGA GAGCTGTGCA AAGAAGAGAA AAACAGTGAA GTGAAGTGCA CAGCGTGCAT 1020
CTTTGACAAA ACTGCAGAAT CATTACTAAG AAGCCCCGAG GCCATATCCT TCTGAGGAGC 1080
AAAGAGGTCA CCCCCAAATC ACACATCACT CAACAAACAC TTACTGGATG TTTATGATGT 1140
GGCTGATATC CTTACTCGCA GGCATGTAAA TATGAATAAT TTATGGACTC TAAACTCAAA 1200
AAAGTGAAAT ACCTTTCCTA GCATCCTTCC TCAGGGCCAA AGAAAGAGCA CATAGAAGAG 1260
AAAACAGAGC AGTGCCCTGG GGCAGCAGAG ACATGAAACA CTCCTCTCAA GGCTGAAAAA 1320
ACCTAGATAG ATACATTGTT TATTAAATAA CAGAGCTTTA GATTTTGTGA GCCTAAGATC 1380
TTTAATATAG AGATCAAAAA TAATGTGCCC TTGTTGTAGC TGACACATCC CATATGGCGT 1440
TTTAAGATTG GCTCTTTGCT TTCCATTTTT CTCTTGGGTT CTGTAAAGAA GAAAGGGCAG 1500
TATGCACAGG GAGCTTGTTT TGAAACTCCA AACCTTATCT GGGTCAATTA TTGCTTGTCG 1560
GAAGATAGCA AGAGGTAATA ACCGAACATA AATGAAAAAG GAAACTTTCT TCCTGGAGGA 1620
AACAGAGAAG GCTTGGCTTA ATTTTCACTG GCAGAGGGAT TAGTAACAAA CTCAACGTCA 1680
TCATCCAAAA TCATGCCTGG ATCTGCACCG AGAGGGAAAC ATCCAGAGGG CCAGGGAGGG 1740
AGGGATAATG TATCAAAAGA GACCCATGGT CCCTGTGTGC ATCTCCAGAA AGTGTCCCAT 1800
TCTAGTTGGG AGGTGGGCTT TCAGACTGAT GTCACAGCCT ACCAAAGGGC TTTGTAGAAG 1860
ACCAGGCAAA CCAGTCAAAC TACTAAATGG ATAAAGTGAA GAGCTTTATT CAAAGTGGGA 1920
ATGGCCACTT TGAAATGTTG TCTTTTCTTT GTCTCCAGGC AACAGGCTCA GTGATGTCAA 1980
AGCTTAGAGT AAGGAAGGAT GCATGTTATG ATGACAAACT TAGCACTCAG GATACAGACA 2040
AGGGGAGTTC AAATACACAC AGACCCTCCT CCGGTCTGAC ATAGGGGTAG CTTCTTAGCC 2100
TTCTGAACGA GTTTTCTTAT CAGTAAGATA GGATTTCAAA CGCCAAAAAG CTATCAAGAA 2160
TAGTTTATGG AAATCCGAAC AAAAAATACA CGTAAACAAT AGTTTCTCCA TGTGGGGAAT 2220
CCTCAGCCAA TCCCCTTGCC CTCCCTTACC AGGGGCAGAA AAACAACATG AAGAAAGACC 2280
ATCCCTAAAT CCCAACACTG AAAGACAAAT AAACACAGAA CGTTGATAGC ATGTGTCCGA 2340
GCTCCCAGGT TTGTGGAATC ACCTTATTGT CCGATCCTAT GCCGTTCTCT CTTTTGAAGA 2400
CTTGACCATA GACAGCTAAT CTGTGTGTCC ACCAAGGCCC AGCTCATCTC AGACCTAATC 2460
CATTCACAGA TCCAAAACAG AGGCCAGGCT TTCTCATATC CACCTGGCCT GGGCCAGACC 2520
TCTGTGCTTC AGGGTCCACA TTAAAGAAGA CAGGAAGAGG AGTAAGTCCC ACTGCCCAAG 2580
TACTCAGAAC AAGAAGCCCA AACTCAGTGG AAAGAAAGCA AGCAGCCTAA 2630