EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM113-00411

Organism

Mus musculus

Tissue/cell

Neural_tube_embryo

Coordinate

chr1:64350720-64353070

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFE2	MA0841.1	chr1:64352322-64352333	CATGAGTCATG	-	6.02
RREB1	MA0073.1	chr1:64351650-64351670	CCCCCAAACACACACACACA	+	7.55

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_00236	chr1:64341729-64352413	pro-B_Cells
mSE_07937	chr1:64350458-64352898	Intestine
mSE_11860	chr1:64350459-64352913	Placenta

Enhancer Sequence

TTTCAACATA ACCTGGTATT TTCTAAGTCA CAAAGGGACT GCCTTCATCT TCTAAGCCAT 60
GAGGTCTGTA ACAAAGATCA CCACCCCCAC TTCCCACCAG TCACCAAAGG AGTAACCGAC 120
TGTCTGGGTC CATGTGCTCC GGGCACATGA AACTCTTACA ATGAAAATCT TCAGTGTTGC 180
ACTCCAAGTC TCCAGTGGGC CACCATAGCG ATCTGAGGGT GAAATGAAAC CAGTAAATCC 240
TGCCAGTGCA ATAAACTCAG AGTCCCCTGC AAGCTCTGCC CTCTCCTGTT CCCTCTGTAT 300
CCTGTCCTCC TCCCCCAGAC CAGTTCTCTG GCAGAGTCAA CCGAGAACAA GACTTGGTTC 360
CAACCTGATC CCAGCCTTAG TTCCAGCTTT GTGTGACTGT TTTGTTTTGA AGCAACCTGA 420
TGCTGAAAAC GTTCAGGTCG TAATGACTGG GAAATGTGAA ATATTTATCA TCTGATATAT 480
CAGCTGACCT GGCACTTATA TCCCATTATC TCCAGTGCTA GTATTCTGGT TCTAGTAGAA 540
CTGATACCCA GCTGCACTGT GGACCAAGGG GTTAAACTAC ACCCCAATCA CAGAGCTGTA 600
TGCAAACCAG TCTTTTGTAC TGTTATCTGT AGAAAGCTAA GAGATAGGTG TAAATAAAGC 660
AATGTCCTTG TTTGCCTATA GGTTTTCAAT CTTTTTCTTT CAACATGAAA GCAGAGACTT 720
TGCCCTGTTG TTCATATACT CAATTACACA CAGGTGTAGG GGACCTTATA AACACATACA 780
CATAAACAGA GAAGACGCAT ACAGACCACA CAAATGCATA AGCAAAGAAA CGAGAGAGAG 840
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAA ACCACACTCA 900
GAGACCATAT AAACACATAA ACAGAGACCC CCCCCAAACA CACACACACA CACACACACA 960
CACACACACA CACACACACA CACAGAGGTT GTTATACTCT TGAACTAAGA GAAGCCAATA 1020
AGCAGTTTTC CTCTTTGTTT CTTGACTGTT TGGAAACAAG AGAAAAGTTA AGTGGCCCTA 1080
AAGAGGGGAC CAGATGGGAT CTGGGAGGAG AAGCCTAGAG GAAGAGAAAT TGCAGCAAGA 1140
AGACTGTTTT GCTTCAGAGT TCCTGCCAGA AGCAAAGAAG AAGGTCCCAA GCTCCAGCAC 1200
TGTGACCCCT TGGTAATTTC CCTGGGGAGC CCCACCTCAG ACAACCTTTA CCCCTCAGAA 1260
TCCAGGGGAA GCTGAGCTCG GTAAGTTCCA AACATAGAGG GCAGACAGTG ATGGAGGGTC 1320
TAAAGCCACA GGCCTGGACA AGGTTCCAAG TGGGCCTGCC TGACAGCCAC AGAAGCCAGC 1380
TGAGCCAATG GGGGGACAGC CACGACACCA GCTGAGCCAA TGGGGGAACT TTCTGCCTGA 1440
TGAGGCCTGC TTCCCAAGAA GAGTACTGGC AGTTTCCCTC GACTCTTGTT TTCCTGTGTT 1500
TAAAATGAAG GACTCTGCGG CTTCATGTGA CCACTCTTGT CAGAGTCTTT GCTCGGAGAG 1560
GTGTTTTTGC ATTTGTGAAG CCTGCCAGGA AACAGCGTGA GTCATGAGTC ATGGCTTCTG 1620
AGCAGACACT ATTCAGCTTT AGAAATTCCC AGAGATACGA CTTGTTTATA CGAAAGGAAG 1680
CAGCTATTCT GAGCTGCCCG AGGAAGAGGA AAGCGCTGCT CTTTTTTTCC CCCCATTTAA 1740
ACACCCTGGT GAAAGGTCAA CTGGGCAGCT GCAAGGCAGC GAGCCCCTAG TGTAGACACT 1800
GGTGTTCTTC AGTGCATCCG TCTTCATTTT ACGGGGTATT TCTGGGTTTG GCATCTCAAA 1860
ATGCAAGTCC TGTGACCCTG AAATTTCACT CTCAGCCTTT GGTCCAAAGT TGGGGTTTTT 1920
TTTCTTTTTT TTCTTTTTTT TTTTTTTTCT TTTTCTGTGC AGGCTCTGAG TGGGAACCTG 1980
TGACATGGGG ATTGAGAGCC AGGAGGTGAC CATAGAAACC CACCATCTTT GACAATTTTC 2040
TAACTTCCAG TTTCAGAGTA AGGCACGGCT TTTTACTCCT ATATACCATG CTGCCGTCTT 2100
CAATGTCCTC TATCCTTAGT TTTATCAACT AGTGTGTCCG CTACCATTAC TTTAAATGGT 2160
GGTTCAAAGC TCTGCAGGAG AATATGCCCA AAGGGATTGC CACTATTACA ACTGTTTCTT 2220
CGTTGACCCA CTATCTTGGC CCTCGGGTGT TAGAATGCAT GGTGTCACCG ACTGACTTCC 2280
AAGACAAAAC CATTCACAAA GTATTCACTG ATTCGACAGT CATGGGCCTC TGTGATGGTA 2340
ACAGGGACAA 2350