EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM113-00193

Organism

Mus musculus

Tissue/cell

Neural_tube_embryo

Coordinate

chr1:38504220-38509010

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gfi1b	MA0483.1	chr1:38508475-38508486	AAATCTCAGCA	+	6.32
KLF4	MA0039.3	chr1:38506843-38506854	CCACACCCTGC	+	6.62
LEF1	MA0768.1	chr1:38505050-38505065	AAAGATCAAAGATGT	+	6.01
NRL	MA0842.2	chr1:38506618-38506631	AATATTGCTGACA	+	6.03
ONECUT3	MA0757.1	chr1:38506360-38506374	GGAAAATCAATACA	+	6
RARA(var.2)	MA0730.1	chr1:38504411-38504428	TGACCTCCATATGCCCT	-	6.13
Rarb(var.2)	MA0858.1	chr1:38504411-38504428	TGACCTCCATATGCCCT	-	6.16
Tcf7	MA0769.1	chr1:38505050-38505062	AAAGATCAAAGA	+	6.74
ZNF263	MA0528.1	chr1:38505588-38505609	CCCCTCCTCCCCCCCACCCCC	-	6.09
ZNF263	MA0528.1	chr1:38505098-38505119	GGAGCAGGAAGCAGGTGAGGA	+	6.17
ZNF263	MA0528.1	chr1:38506815-38506836	GGAGGAGGCAGAGAGAAGGGA	+	6.84
ZNF740	MA0753.2	chr1:38505187-38505200	CTACCCCCCCCCC	+	6.13

Enhancer Sequence

CCTGGACCAG AGCAGGACCC AGGCTGCTCA GGAAGAAGGA GCCACTCTTA CTTCCAAGAG 60
TCCAGCCCTT TCTTACAGCT ACCCCTGCAA ACATTTAGCC CCACACTGCT GCTCCACTGC 120
CCAGCTGGCC TGCAAACAGC CCGAGGTCAG AGAATAGCCT TTGGTGTGCT CTGATTCTGT 180
CTGGGTAGAG GTGACCTCCA TATGCCCTTG GCTGGCCAGG TGCAGCATCC TTGTCCTTAC 240
AGCTGAACCT TCCCCACCTC CATCCTAGAT GGAAGCAGAC AGGGAGTTAG CTTCTATGAC 300
CACTGGAGCC TCACATTGCC AGACCTGGTA TCTCCTTGAT AGCAAGGCCA GGATGGGATC 360
TTATATCAGG AGTTTCCTGA TATAAGTTTC AGGAGTCAAG GGAAGGCAGC AGAGCTGTGA 420
GCCACTGATA ACATGATGAG GTGGTTTATC ACTTAGCTCC CAAGAGGAGA GGGCGTGCAC 480
ACCGGAAAGG GCACAGCAGA GAAGCCTCAG CCTTGGTAAG GAGGTAGTGG AGAAGAGAAA 540
AGCCTAAGTG CTTTTTGATG CTTGCCCTGT GAAGGAATGG TGAGGAGGGA CAGGCAGCCT 600
TGGGTGACTT GGAGTGTGTA CGGTTATTAC TAGATTATTA TTAGATTATT ACTAGATTAC 660
CTCTAGTAAT CTGGTCCTTG CCCTTGCATG ATGATGGCTG GCTGATGGGG TCATCAAGGA 720
GGTGGCTGGG CCGTGGGCTG CTCCACAGCT TGCAGCACCT GCAGGCCAGC TCTTTGCTGC 780
TTTGGGAATC AGGAAGCCCT AGGAGAGACC TACAGGTCCT CCAGGTTGAG AAAGATCAAA 840
GATGTAGGAT ACAGGAATAT CATTTGAACA AGGGGAAGGG AGCAGGAAGC AGGTGAGGAT 900
GGCATGGTGT CTAAGTGGAT GCTGAGGCAT AAGGACCCCT CTCACTGTTC CTAGTACCAG 960
AGAGAGGCTA CCCCCCCCCC CAAGCCCTCT GCCCCACTCC TCCTGAATCC CAGAGCACAG 1020
AGCAGAGGAG GCTCCCTTAA CACTACAAAA GCATATTCAA CTTCACTGGG AGAGGTGACA 1080
GAAAAAAAAA AAGGCACATG GGATCCATGA CCCTGGAAGT ACCTTACCCA GTGTCACATG 1140
GCTACACATG ACAGTGGCAG GGTTATATCC AGGTCTAGGT CACCTTACCT CTTAGAATCC 1200
TTACGGGTTC CAGAATAAAA AGAGAAAGCT ATAAATGTCA AAGTTTACAT ATGGATGGCT 1260
AGCTAAACTT CTCAAACACA CAGGGTTGTT TCTGTTATTC TACATATCCA TTTAAAAGTT 1320
ATGTACACTT TCAGGGCTGA CTGTGTGGTA TGGATAAGAG ACCATGTCCC CCTCCTCCCC 1380
CCCACCCCCG CTCTCAGCCC TCCTTCCTTC TCTGTAATTC TTCGTGTGGG TTTGAGACCT 1440
CACGTGCTCT CTGTCCATCT TGGCATATCT ATGGTTGTTC TCTGTCCCAC TCATCTTTAG 1500
GCATTCACGT GGGTATGTAC CTGGCTGCTG AGTGCACCCA TGGCTGAGCG AGCCTGCTGC 1560
CCTGGGAGCT ACTTCTCTGC TCGCCACCTT CTAGTTCCCT GTACCTCCCT CTCACTGAGG 1620
CTTACAGCCC CACCAGCTCC TACTGCCTAC TGAGTCTGGA ATCTAACACC ATGATGATCA 1680
GTGCTCCCTC CCACCCTGCC TCCTGAGGCT GAGCTGCTAG GCTCCATCAG GAAACACTCC 1740
TTCTACTCTC CCCTTCCTCC AGGAACTCAG CCTCCCTTCT GCTTCCTGCC CTCACCTCCT 1800
CTTCCCCAAG CCTGTTGCTG CTGATCCCAC CCCCAGGCAA GATGAATAAC TCTAGAGGTC 1860
CCCTCACAGT GCAGGACATA CAAATGTCTT TAGTAAGTAC ATGTGGATTT GATATACATG 1920
GTTGGGGCAG CACAAAAGTG TATGCAAAAT ACTGGATATC TAAGTGGGGG AGGGTACAGG 1980
CCATTTTCTG AAAAGTATTT CCTTTTCCTT CTTTCAAACC TACCTTAACA AATGAACGAT 2040
GGCCTTCCCA ACTCCAAATT TTAGCAACTT TAACTGCAGT TCTCTGAAAC AAAGGTCACT 2100
TGCTCAGCTA CAGATAAATA AAAATTCACA AGCATCTCCA GGAAAATCAA TACACGTACT 2160
AAAAAATCTA AGTTGATAAT AAATTTTAGT TCCCCTTGCA CACGGCTCAG GAATGTCACT 2220
ATTTACTGGC CCTGCTGTAA TATCAGATAT TTCAGAAGGG TATTGATTTT GCCACTGAAG 2280
TGTGACTAAA GGGATAAATA AACTGCTCCC GGGGTCAATC GATCCATTTA TCTTCACTGG 2340
TATTTTATAA AAAGTCAAAG TAGCATAAAC TTTGATAAAT AAATGTTATC GTGACAGAAA 2400
TATTGCTGAC ATAAGGACCT GAAGGAAGAA AGAACAGACA ATCGCGATGC TTGAAAGCCA 2460
CACAATTGGC TTAACATGTT AGCACTTCCA CTAACAGCTA CTCACACACA AATAGCCCCT 2520
TCAGCTGTTC TACATAATCT GTGGCCCACA CAGCTAAGAC ACACAGGCAG GGCATCACAT 2580
CCTTGTGAAA TGAAAGGAGG AGGCAGAGAG AAGGGAGTGA TTTCCACACC CTGCTTAACT 2640
AGAAATAAAC TGTTAAGAAT ATCCAAAACA GACACATGGC TCTGGATAAG GCCAAGGTAC 2700
GTTTTGGGAT GGCGGAGTGA CTCGGGTTTC AGAAATCAGG ATCGGGCACA ATCTGAAGTG 2760
GCTTTTTAGG GCTTCCACTC AACAGCAGCA CAATGATCCC TTAAAGATTC CAATGTGAGG 2820
CCAGCACACT CACAACCTAG TGCTGTGATA GGATGGGAAG GCCCCAGAAG AATCTTAATT 2880
CAAGTGTGGG AGAAGTGGGA GCTCTGTGAA GAGGCTGTAG CTTACCATGA GAAATTACAT 2940
CTCAGTGCTT GGCTACAGTG TGCCCAGACA GCATTGCCAT CCAGTGATGA ATCCAAGCCG 3000
TGATGAAGGC AGCACCTGGG CTGGTACTGA TCCATCACCA GTTAAAAGTT GAGTTAAAAT 3060
TACCATTCCC CAGGGGACAG CCAGCTTCTG GGATGCAGAA ACAGCTAACA GATTGCACAT 3120
TTGACTTGGA CCTCAAAGGG CTTTCAAACT CAAAATTTTA CCTCAGTCCT AAGGCAAAGC 3180
CTTTGGGTCC TGGACAACCC TGCCCTTCCT GTTGGTCACT ATCAAGGGTC CACTCAGGAG 3240
CCTTCCATTT CTTCCTTCCT CCACCCAGAT TCTGGGGCTG CTGCTGCCTC TAGAGTCCTG 3300
CCCAAGGAGG CCTTTCTCAG GGACTCAAGA GGAAGCCCTG CTCAGCACTT GGCGAGTCTC 3360
GAATCTCCTG CAGGCTGGTG CGGTGCCCAG CAGGACACAG TAGGCACTTG ATACAATGGC 3420
ATTTACTGAC TGGAAGTGTC TGGGTGGCCA GACTGGGCCT GGGATTCTGT TAAGGTCACA 3480
GGATGTTGGC AATGTGGCTC TAAGCAGCTG CAAAAGCTGA GCTGGGCACG AACAGAGTGG 3540
TAGCCATGGG TACCGTCAAA GAGGGAAAGC CCATGACGAA AGGCTGTCTG GCAGGTTTGG 3600
ACTGTCTCCA CAAAATGGGG CTGGCGCGTT CTCGTGACAG CCGGCCACTA GACAGAGTGA 3660
GCCCCAGAGC TCACAATGCG GAGCATTTTC CTCACCCTCC GTGAGAGCCT CCAGTGCAAC 3720
TTAGCTGCAG ACCCTGAAAA ATCAACACCT CCACATTGTG TGAAACAGTG GGCATGTGCA 3780
CATGTGTGCT GTGCATATGT GCATGTGTGC ACACACATTT GTAATGGGGC TTTGGATTTA 3840
CTGTGAAAAG TTTCCCTGAT ATTCCTGACA CTGTAGCGGG CAGTTTGATA CTATTCGCAC 3900
TTAGCAAACC AACTACTAAT AGTAATAGGT TAGTTAGACC TGAAGTCTGA GCTCCCACAG 3960
CCAGGAACTC TTGGCTAGAC AGTATCAAAC TGAATTCTAA ATCGCTACTT CTATAACTGC 4020
AGCTTAGTGT AGGTCTTCAT AGCTCTTGGA CCATTTCAGG GAAGTTTCCT TATAGTTAAA 4080
GCAAGATCTC ACAACTGGTC AAATATATAG CGATGTAGAG TGATCTTCCA CAACTGGGAC 4140
TTGTCTATCA CACCCCTTCC CACAGAAGAG GGGACACAGG ACTTTAAGAC ATGGGAGGTC 4200
AGGGAGGACC ACTGAAACAG CTGTCTCTGG ACATGACAGG ACCACTGAAC TTGTGAAATC 4260
TCAGCAGCCG TGGCTGCTCA CAAGACCCAG TAAGAGCAAG CCGATCAGCA TTCTAGCACA 4320
GAGCGGGAAG AAAGCTCGGG AGGTGAAGAG CTCAGCCTAG AGTCATAGAC AGGTGGTGGA 4380
TTATAGGGAA GGGGAGTGGT TGCTTTAAAG GTGTAGCCTC TAGTAGTTAG ACCACACTCC 4440
AGTAGACACC CACAACCATA AGTACAGGAA CCCGGTAGGC TGTTGTCTGT TGTTTGTTTG 4500
CTTCTTTGTT AAGAGAGGAC ACAGAAAGTT AAGGGGTGGG GAGGAGTTAC CCACATCTAA 4560
AATTCTGAAA AAATAATAAA AAATATTATA CTTAAAAGAA GGTAAGTTGT CTTTGGTTGC 4620
TTTTCTCCTC TCTTTCCCCC CTGTCCATTT TTCTGAGCAT CCCTGACATG TCTCTCCAGT 4680
GATGTACATG GATGATCCCT GCCCTCTAGT CCTCATGGAC AACTTTCTCA AAGAGGCTAG 4740
AGAGCACCGA AGCCTCACCT GCACTCGGGT TCCCAGTGTC TCCACGGCTT 4790