EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM111-00727

Organism

Mus musculus

Tissue/cell

MSC

Coordinate

chr1:122142040-122145980

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrrg	MA0643.1	chr1:122143669-122143679	ATGACCTTGA	-	6.02
Klf1	MA0493.1	chr1:122142236-122142247	GGCCACACCCA	+	6.62
MEF2A	MA0052.3	chr1:122142365-122142377	TCTATTTATAGA	-	6.74
MEF2D	MA0773.1	chr1:122142365-122142377	TCTATTTATAGA	-	6.44
NR2C2	MA0504.1	chr1:122143331-122143346	TGACCTTTAACCCCT	-	6.64
Nr2f6	MA0677.1	chr1:122143331-122143345	TGACCTTTAACCCC	-	7.08
Nr5a2	MA0505.1	chr1:122143668-122143683	GATGACCTTGATCTT	-	6.34
Nr5a2	MA0505.1	chr1:122143300-122143315	GCTGTCCTTGAACTC	-	7.06
RORA	MA0071.1	chr1:122143670-122143680	TGACCTTGAT	-	6.02
RXRB	MA0855.1	chr1:122143331-122143345	TGACCTTTAACCCC	-	7.34
RXRG	MA0856.1	chr1:122143331-122143345	TGACCTTTAACCCC	-	7.34
Rxra	MA0512.2	chr1:122143331-122143345	TGACCTTTAACCCC	-	7.34

Enhancer Sequence

ATTAAAACAG ATCATTTAGC ATAGGTGTAG GTGTTTGTCA GTCTGTGTGT GTGTGTGTGT 60
GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT ACATTTGTGT ATATGAGTCT TGACATGTGT 120
GGATATCAGG GGACAGCTTC TCTACTATGT TTCAAACATC GCTTCTTTGC GGATTTCCTG 180
CATCCTTTGT GGGTATGGCC ACACCCAAGG ACAAGGCCTG CCACTGGTCT GAAGGCCATG 240
GGGAGGCTGA GAAGTTGCCA CTGCCTGTGT GTTTGGTGGA CGTAAGAGGT TGAGTCTGGC 300
CTCTAGCTGT GCCTCTGATG TGGGATCTAT TTATAGACTG AAGGCACGGA GGGAGAGAAT 360
ATCTGATTGC AGCTGTTGGG CCTAGGTCTG TAGCCTGCAC TACTCACCTC CCTGCCAAGC 420
TACAGACAAA ACAGCACTGT GCCTGGGGTG ATCCTGTCCC CTCTGGGCCT CTACCCAGGC 480
TGCTTGTCCC CTCATACTTC CCAGCAGAGC CAAAAACATG GGCTGCAATT CTGGCTCTGA 540
TGTACCGCCA ACCCGCCAGC TCCTGCCAGC TCCTGGGTAT GCAGGAATGA GGATAGTCAT 600
GCAGACAATG GCCCCAGCCT TTTCTCATGG GTTTTGACAA TCCTTCAGAT TCTAAGCAGC 660
CAGGGATGGC CTGCAGGAAT CCTCAGAGTG CAGTTATCCT TCCAAAATAC AATACATGAG 720
AAAAAACACC CGGAACCCAC GATTACCCCC AGCTTCCAGG GATGCCCCTA TGTGATCTTT 780
GGGTGTGTGT CCACACTCTG AGGATGAAGC CCAGAGCTTT GCACATACTA AGGCTCGAAT 840
TCATTCTATT ACCAAGCTGC ACCCTCTGCC CACTTACTTT TCTTAACCTT TATGTGGGGG 900
GAGGGAGATG TCGTAGGGCG GTGTTATAGC GTGGGTGGGC TGAGAGGGTG TGCACATCGC 960
CATAGGTCAG AGAACAACCT TGATGTTGGT CCTCACCTAC CACCTCTTTT GAGGTGTTCC 1020
TGTGCACAGC AGTTGTTTAG TGTGCACAGC AGGCTAGGTG CTCTCCACGC TCTCATCTGG 1080
GCCACTCATC TAGCTGCAGG AACACTGGGA TTACACACAC ACCCCAGCCG CTGGCTTTAA 1140
TATAGGTTCT GGGAATCTAA ACCCAGTTCT CTATGCTGGC ACTATAAGCT CTCTATCTGC 1200
TGAGCCATCT CCCCCATTCT GTTTTGTTTT AATTTCAAAA AGAGGTCTTA CGTAGCACAG 1260
GCTGTCCTTG AACTCAGTTT GTAGCTAAGG ATGACCTTTA ACCCCTAACC CTCCTGCCTC 1320
TACTTGCTGA GTGCTGGGAT TAGAGATGTG GCCATCATAC CTGGTTTATG CAGTGATGGA 1380
GATTGGACCC AGGATCTCCC ACTCATGTTG GGCAAGCACT GTATCAGACA TCCACAACAA 1440
CATCCCCAGC ACCCCATGTT TGATAGAATG TCTATCTATC CTCGGATTCC TCTCTCATGG 1500
TTAGGACTGT GTTAGCTATT TGCTTCTGAC AGACAGTCCC TGCCTAGACC CAGGTCCTGC 1560
TAACCTGCTG CTCACAAGTC CCCCATGTCC ACAACACATG CGTAAAACGC TGACCCACAA 1620
GAACAAGAGA TGACCTTGAT CTTGTCAGCC CAGAAACCAG AAGTTCACGC ACTGAGCAGA 1680
AGTGGAAAGC GGTATGGCCA CTCTGGAAGG AGGTGTGTCT GATGGGTCCT CCTAAAGTTA 1740
GGCAGAGAGT TTCCCACTGC TCCAGCCATT CTGCTTCTGA GATCAATGAA AACACATCCA 1800
TGCGAAACAC ATATTAGCAG TACTCGTAAT AGCGAAAAGC AGGCATAACT CATGCCTATG 1860
AGCTGACTGT TAAATGAACA GAGGCCATCC CAGGAGTAGA GCACTGCTCA ACTGTAAAGA 1920
GGAACTATGC ACTAATTCCT GCTCCTGCAT GGTGACCCTT GCCATAGTAT GCTTGCCAGC 1980
TGGAGTAGCA CATGCCTACA GGCCAAGCAT CTGAAAGGCT TAAGGGGAAG AACTTTGAGT 2040
TCAAAGCCAG CCTGGGCTAC TTGCTAAGGC CTGGGTCAAA CAAACAAATG AAAGCAGATG 2100
CTTAGGAGTC AGGCAGTGGG AAGGGCCATG CATCCTATGA CTCCATCAGT GTGAAGACAC 2160
CACGAGTAAG CAGATCTGCA GATAGAAATC GGATTAGTGG TGGCAGGCGG AGGAGGGGGG 2220
GCTTCAGGGA AAGTGGAGAG TGAGCTCACC AGCACCAGGT TTCTTTTTGC AGTGACACAA 2280
ATATTACAAA ATTGACTGTG GTGACAGCCG CACAGTTGAA GATATGCAAA AAAAATAAAC 2340
ATATGTAAAT TGGGCGCATG CAAAATATAT GCTCGAGCGG TGGCTCAGCG TTTTAAAGCA 2400
TGCACTGCGT TTGAAGAGTT ACAAGTTTGG TTCCTAGCAC CCACAATGTG TGGCCCACAG 2460
CCTGTAAGTT CAACTCAAAG AGCATCTGAT ACCTCTGACC TCACGGGCGC TACACTCATG 2520
TGCATGCACC CACACACAGA CACTTAGTTA GAAATAAAAA TAAAGTAAGT TTGTTTTTAT 2580
ATGCTTGTTC AGCATATCTA ACGACTCTGG GTTTAATCCC AGGCATTACA CATACAAGTT 2640
TTGTTTTTGT TTTTAAAGAA ACTGGGCTTC TAAAGGCTAT TATTTCTGTA ACTGAAGAGC 2700
AAGCATGCTT TGGGGTTGAG CCTGGATTCT GTGACTCACT TGACTCTGCA CCCCAAGGCT 2760
GTTTCTTCGT CTTCTACCTA GTGGAGCCCT CCAAGCCCCG TGACCTGCAG AGAAGCCAAG 2820
CTTATGCAAC AGCCACTGTT AGCTGTTGGA GAGGAGCCAC CGTCTGGTCC CTGGACTCAA 2880
CAACGCCCTT GGCTCTCAAC ATCCCTGGTC CTGGAGGGCC CTGGGGCTTG TTTCGCCTCT 2940
GATGAGTCCA TCATTCCAGG GCTGTGTGGA GAGATCTGTG TGGGAGTCTC TGGGGGCACC 3000
CCCTCCCCAC TCCCAGAGTG GCCTGGTGTT AGGACAGTTG TGCTCCAGGT GGGAGGGACC 3060
ACTCTGCTAT TCACTGGAAG GTCTGGGGTT TAAATAAGGA CATGCAGCTG GATAGGGCAC 3120
AGCTGCAAAT CTTCCAGGAG GTTGTGCATC TCATTCCTCC CACTGCTGTG AATCTTGTTT 3180
GTCCCCTCTG AAACTCACAC TGAAATCTAG CCCCACTAAG GGGCACAAAG AGGAGGGACA 3240
TTTAAGAGGT GGATTAAAGG GGCTGAAGGG GAATGCTCAG TTGACAGTAC CTTGCAAGCA 3300
TGAGGCTCTA AGTCTGATAT ACAAGACCCA TGTAGAAAAG CCAGCCATGG TGGTGCTCAT 3360
CTTGTAACCC CACAGCCGGG GAGGAGGATC ACTGGGGCTC CCTGGGCATC TAACATAGCC 3420
ACATCAGTAA GTCCCAGGCC AGTGAGACAG ATACGGGGAC CTGATGAGAT GACTGAGTGG 3480
TCTTAGATCT CAAGTAGTCT CTATGTCTAG AAATGACCCA AGATGGACTA TAGAAGGATT 3540
TCTGGCAGAG AGATAAAAGT CAGCATTCCA CAAGAACTTG TGAAACAGGT CCATGTTCCC 3600
CTAACAGGAG ATATTTCTCC TTGCCTCTGG CAGGAGCATG TGGCTCTCCA TTGACATATA 3660
CCTGTGCCTG TATATCAAAA CCCACATTGC TCTCTAGGTT CCCCCAGTCC CTACCCACAA 3720
GTACCTACTA TATATTCCCA AGCTCCCACA CTAGCCTCCT GGCCTTTCTC ACCTCCTCCA 3780
CTACCCTAAA CTGTGGGCCC CGCTCCAGCT CATGGGCTTC CCTCCCCAGG CTGCTCATCC 3840
TTCTTATAAC TCAAATGGTT TTTCCGCCCT GTGCTCTTTC ATGGACAGCC CTGGCCACAG 3900
CCAATCTGCT TCTTTCTGCC CCTGCTCTGG ACTTTTCCAG 3940