EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM107-00041

Organism

Mus musculus

Tissue/cell

Microglia

Coordinate

chr1:37641420-37644120

Target genes

Number: 6
Name	Ensembl ID

Inpp4a	ENSMUSG00000026113
Unc50	ENSMUSG00000026111
4930594C11Rik	ENSMUSG00000087233
Mgat4a	ENSMUSG00000026110
Tsga10	ENSMUSG00000060771
Lipt1	ENSMUSG00000037216

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE40	MA0464.2	chr1:37642936-37642946	GTCACGTGAT	-	6.02
ELK3	MA0759.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV1	MA0761.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV4	MA0764.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
IRF1	MA0050.2	chr1:37643186-37643207	TGCTGGTTTCGCTTCCTCTTT	+	6.04
IRF1	MA0050.2	chr1:37643192-37643213	TTTCGCTTCCTCTTTCTCTTT	+	6.6
Lhx3	MA0135.1	chr1:37643682-37643695	AATTAATTAATTT	-	6.92
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	-	6.02
RELA	MA0107.1	chr1:37643129-37643139	GGAAATTCCC	-	6.02
SREBF2(var.2)	MA0828.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
Srebf1(var.2)	MA0829.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
TFEB	MA0692.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
USF2	MA0526.2	chr1:37642932-37642948	TGGGGTCACGTGATTC	+	6.41

Enhancer Sequence

AGAATCCTAT AGGGATGAAG TTTGGTTGCA ATAAAGGTGG AAGACCCATG ACAACAAGTG 60
TTGTATGTAT TTGAGTAACT TCATGTGGGA GCACTGGTAG GTGTGTGTGT ACCTGTGTGT 120
GTGTGCATGT ATGTGTGTGC ATGTGTATGT GTGTGTGTAT GTGTACATGC ATATGTGTAT 180
ATGTGTGTGC CTGTGCTTGT GTATGTGTTT GAATGTGCTT GTGTGTGTAT GTGTGTATAT 240
GTATGTGTTG TGTCTGTCTG TATGTATATG TGTATATGTA TGTGTGCCTG TGTATGTGTG 300
TGTGCATGTG CTTGTGTGTT TATGTATGTG TGTATATGTG TGTGTGTGCA TGTGCTTGTG 360
TGTTTATGTA TGTGTGTATA TGTGTGTGTT TGTGTATGTG TGTGCATGTG TGCTTGTATA 420
TATGTATGTG TGCATATGTG TATATGTGTG TACCTGTGCT TGTGTGTATA TATGTGTGTA 480
TATGCTTGTG TGTGTATGTG TGTACATGTG CTTGTGTATG TATGTATATG TACGTGTATG 540
TGTGCATGCA TAGTCATGGG AAAGCATACA AAGCATTCCT TTTGAGCTGT GTACCAACTT 600
CCAACCAATA TGAATGAACT TTTACCTTCC TCCAAGCTGG CTTAGGACCA CAGAGGGAAT 660
TGGCTTTGTT CCTCTACTCT AGTGACGCCA CCCCTTGCCC CTGAGTATTT CCAGTCCCAT 720
AGCCACTATC CACTAGAGCA GTGGGAGGGC TCAGCGAATG CATTTTCTTA TGGCCATTGC 780
TCACCAACCT GTTTATGAAA GAGGTTTGAG GCGTGACAGC CAGTAAATCT CAGTGTTGCA 840
TAAGGACAGA CACTTGTTCT CGCAGTATAT TTGAAGCCAC TGTTGGGGGT GCCACTCAGG 900
ACTCTCCAGA GAAACAAAAC CAGGAGCAGA GACACACTTG TGAAGATGCA CGCATACACA 960
GAAATACCCT CTCCTCTGTC TGTTGTGAGC TTAAGTCCTG ACAAATCCAT TGCAAGTTAA 1020
AAATAAATAC CAAGTTTAAA AAAAAAAAAA AGAAAAGCAT TCAATACATC CAGCCTAGCC 1080
CACCATGCTT GGTCACTTAA TAGTCTGCAG CATGGCAAAG GTATCCACCA TCAAGCTTAC 1140
CCTGCAACTG ACTGTCACAG GAACCATCCT GAAGTCGGCC TGTGAGAACA GAATGGGTAT 1200
GTAGATACTC ACCATTAAAA CTCGCCACTG GAAGCACACT GGGTCTGCAG ACTAAGAGAA 1260
ACATTACATT CAAAGGAGAG CTGAGTGACA GGCACACCGG AAGTACTGAG TCATCGGTTC 1320
CCGGCTGGAA CCTGCTCACC GTGCCAAGAC TGCATTGCCA GCCTAGGGCT GGAAGAAAAC 1380
CCAAACCTGA AGCGTGGTTT CTACTGAGTG ACTGACTGTC TTTGTACCAC AATGAAGTTG 1440
GGACTGCAAA AGCTGAACCA TCGCAAACCC AGGACAGTGT GTCTGTGCAG TGTGGAGGTC 1500
TGCGGTCAGC TGTGGGGTCA CGTGATTCTG AAGGCCCAGA AGGCTCCTCC ATGTGCCATC 1560
TGTCAGTTGG AACAGAAAGG CTCATGGCAC AGTTCAGAGG TATGAGCTGG AGAGCCAAAG 1620
GCATAAGTTC TACTTGGGTT GAAGTCTTGA GAAGCAGAGG CCCAGAAAAA GAGGAAAGAC 1680
CGATATCTTC TCACAGAAGC CTGCTGTGCG GAAATTCCCA GAGCCTCAGT CATACCCTGG 1740
CATGCTGCCG CTGCAGCTGC ATTTTCTGCT GGTTTCGCTT CCTCTTTCTC TTTAACCTCA 1800
CAATATAGCT GCTAGCCTGG TCTCTGTATG GGAGGGGTCT GCATTCTGTG AGCCTAATTC 1860
AACAGTACAT GCTGAGTACT TAGCCTTTGG CAGATGACAC GTAAGACACA TCAAAACAAT 1920
CATCCATCAT GATCAAGTAG GCTTCATCCC AGGGATGCAG GGATGGTTTA ACATAATCCA 1980
CTATATAAGC CAACTCAAAG ACAAAAACCA CATGATCATC TTGTTAGATG CTGAGAAAGC 2040
ATTTGACAAA ATCCAACAAC CATTCATGAT AAAAGTCTTG GAAAGATCAG GAATTCAAGG 2100
ACCATAACTA GACATAATAA AAGCCATGTA CAGAAAACCA GTAGGCAACA TCAAACTAAA 2160
TGGAGAGAAA CTTGAAGCAA TCCCACTAAA ATCAGGGACT AGACAAGGCT GCCAACTTTC 2220
TCCCTACCTA TTCAATATAG TACTTGAAGT CCTAGCCAGA GCAATTAATT AATTTTTAAT 2280
TAGCAATTAA AAAGAAGATC AAGAGAATAC AAATTGGAAA GAAAGAAATC AAAATATTTT 2340
GCAGATGATA TGATAGTATA TATAAGTGAC CCTAAAAATT CCACCAGAGA ACTCCTAAAC 2400
CTGATAAACA GCTTCAGTGA AGTAGCTGGA TATAAAATTA ACTCTAACAA ATCAGTGGCC 2460
TTTCTCTACA CAAAGAATAA ACAGGCTGAG AAAGAAATTA GGGCAACAAC ACCCTTCACA 2520
ATAGGCACAA ATAATATAAA ATACCTTGGT GTGACTCTAA CTAAGCAAGT GAAAGATCTG 2580
TATGATAAAA ACTTCAAGTC TCTGAAGAAA GAAATAGAGG AAGAACACAG AAGATGGAAA 2640
GATCTCCCAT GCTCATGGAT TGGCAGGATT AATATAGTCA AAATGGCTAT CTTGCCAAAA 2700