EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-29520

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr9:57120400-57121680

Target genes

Number: 17
Name	Ensembl ID

Snx33	ENSMUSG00000032733
Imp3	ENSMUSG00000032288
Snupn	ENSMUSG00000055334
Ptpn9	ENSMUSG00000032290
Gm10658	ENSMUSG00000074284
Sin3a	ENSMUSG00000042557
Man2c1	ENSMUSG00000032295
2410133F24Rik	ENSMUSG00000086728
Neil1	ENSMUSG00000032298
Commd4	ENSMUSG00000032299
1700017B05Rik	ENSMUSG00000032300
Gm5121	ENSMUSG00000066626
Ppcdc	ENSMUSG00000063849
Scamp5	ENSMUSG00000040722
Rpp25	ENSMUSG00000062309
Cox5a	ENSMUSG00000000088
Csk	ENSMUSG00000032312

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr9:57120644-57120656	CCAATCACAGCA	+	6.02
RARA	MA0729.1	chr9:57120919-57120937	GAGGGCAAAAGGCCAATG	+	6.83
Stat6	MA0520.1	chr9:57121217-57121232	TGCTTCCTCAGAACT	+	6.05
ZEB1	MA0103.3	chr9:57120900-57120911	GGGCAGGTGCG	-	6.02

Enhancer Sequence

AGTTTTGAAT CACAGCAGGA ATGCCAGGAA GCCAAAACCA CAGTCTTTGC TTTCCCTCCA 60
GAGGCTCAAA ACCAAGGGTA GTGGGCACTG ATCATTCCAG TCCCTCTGCT TTAGAGACTT 120
CTGCCCAACA CCAGCTGAGC GGCCCATCAC CCTCCCCATC AGTCATGCTC ATCCCACCTC 180
TGGGTTCCAT CTTGGTCCTC ATTCCTGTCT CGGTTCTAAT GCACTGACCA GGACACATAC 240
TAGTCCAATC ACAGCAGGTA CCAAAGGCCT TGAATTCTTT ACCTTCAGTA GGCAGTCAAC 300
GCCCCCCTCC CCCACAGTCA AGGGTACCTT GGCACAATCC CCTTTGCCCA TGCTATATCT 360
TCTAAATGAA CCTCCCCCAG AAAACCACAA GGATTTCCTG TGACCTGCAG CCCTGGACCC 420
TTCATGCTGA CAGACTAACC ACAACAGAAG TGTCAGACTC AGATTAGCCG GACCCCGCCT 480
GTGACTGTGA TCCCACGATG GGGCAGGTGC GAAACTCTTG AGGGCAAAAG GCCAATGGAA 540
ACATTTGAGG CTGGATAGAT GTGTGCACTG CTCAGCCAAG CAGTGGGGCT ATGGGCAGCC 600
CTAGGAAGTG TTGATGAACA CAGAAGGGTT TGGATGTGAG AACCTAAGGA GGGTTCTGGG 660
TCCACGGTGC ATGCCTTTCC TCAGGCAGAC TCCCACCAAA CCTTGAATGT CCACCCTGTC 720
GACTTCCCAG GATCCCTGGC TGTCTGGCCC TTGCGTCAGG CTCAGTGGTG ACAGAATGAT 780
TCCACTGTAG CCTCTAACAG AGCTCTGGCC TGGGGTGTGC TTCCTCAGAA CTTGATGAGT 840
CAAGACAAGG CTGCATGAAG CATGCAGGCT CTCCCTGAAC TTGAAAATAT CTGGAACTGA 900
GAGGCAGGGA GAGGACAGGT TACTTACAAT CTATGCTAAG GGGCTGTGAG CTAAGATTAG 960
TGTCTGTCTT CCTGGGTTTG AATCCCACCT CTGCTTGTTA TCTGAGCTGC CTGCGAGAGT 1020
CACTCCATCA GGGTCAATTT ACACAAGTAT GAGGCTCAGC ATGAAGCTGG TGGAAGCTCC 1080
CCATGCTCTC ATCATATGAA AGGCCCTCAG AACCAAAACA AACCAAAAAT ACCTACCTAC 1140
CTACCTAGTT CCTAGTCAGC TTGGGTTACA ATGTAAGACC CTGTCTCAAA GATGCATAAA 1200
TACACACACA CACACACACA CACACACACA CACACACACA TATATATAAA TCAGTCGATA 1260
GGATACCTAC TGCTTCCATC 1280