EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-22730

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr5:35316530-35317860

Target genes

Number: 8
Name	Ensembl ID

Sh3bp2	ENSMUSG00000054520
Add1	ENSMUSG00000029106
Mfsd10	ENSMUSG00000001082
Htt	ENSMUSG00000029104
Rgs12	ENSMUSG00000029101
Mir3097	ENSMUSG00000093097
Hgfac	ENSMUSG00000029102
Lrpap1	ENSMUSG00000029103

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr5:35317716-35317727	ATTTTAATTAA	+	6.62
SREBF1	MA0595.1	chr5:35316759-35316769	GTGGGGTGAT	-	6.02
TCF3	MA0522.2	chr5:35317380-35317390	AGCAGGTGTT	-	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06381	chr5:35316255-35320575	E14.5_Liver
mSE_09095	chr5:35315290-35320481	Lung

Enhancer Sequence

GGATGAATAG AAGAAGAAGT GTAGCTTCTT CATACAGTGG ACTTCAGCCC TGGAAAGGGA 60
AGACATCCTG ACATGTGCTA AAACACGAAT GAGCCTCGAG GGCATTATGG CCAAAGAGAT 120
GAGGATGTAG TGATTCTGCT TCTATGAGGC CCCGAGTGGT CATTATTAGG CAGGAATACA 180
GACATGGGGA CAGTGTCCAC GTGGGATGGT GAGTAAGTGC TGGGTGTGGG TGGGGTGATG 240
GCTGCCAGCA CTGGTGTTCT TAGCACTGCT GAGGAATGGT GGCTTAGTTT GTGTTGCTGA 300
ACGTCACAGC TGAGGACTGG CCTCCAGTGT GCTCTCTGTG GTGAAGGGCC AGCTCCAGGA 360
ACCAGTGAGT GTATTGAGGG GACTGCAGGG TATTGCTGGG GGGTTGCTAC AGGACTGTGG 420
ACACCTTTAG GCCCCTGCAT CACTGAGAAA CTCTTTCCAG GATGAATGGG GACCCATGAA 480
AGCTGTAGCC TGGGAGTTCC TCACTTAACA ATAGCTCGCT GCTTTTACTG GGGAGGCTTT 540
GTGATTCCTT TCAACTTTCT AAGCTGTCCA AGCCAGCTTA CCCCTTTTCT AAAATGTGTA 600
TGTGTAGGCC ATGTGTGTCT ATGGGTGCCA CAGGAGGCCA GAAAAGGGTA TGTAGCCCCT 660
GGAACCAGAG TCATAGACGG TTGTGATCCA CTTGACATGG ATGCTAGGAT TCAAAATCGG 720
GTCCTCTGGA AGAGTAGGAA GTGCTCCTAA CTGCTGGGCC ATCTCTCCAG ACCATAGGCC 780
TGCTTCTATT TGCTTCCCAA GTCATACTCA TTTTGTTAGA GCCTAAGGAG GCTCTTCTGA 840
GCCTCTCAGG AGCAGGTGTT TGAATTGAGA GGAAATAGCA GCATGACATT GTCATTTCCT 900
GGAGGAAGAA ACCCAGGCCT TTTGCTGAAA TGATCCTCAG ACACTGGCTA GGGCGTCCTT 960
GGCTTCTTAA AGTGAGCTAA GCTGACACAA AAGTACGGGC AGGTGAAGAC AGCCTTCATG 1020
GGCTGGTTCT TCACACACTA TCAGTCCGTT CCTAGAACAG GCTGTCTGCA TGCGGTGGGA 1080
AAGCAGGGTG GGCCTTATCA TCTAGGGCAC ACAGTTGGTA GCTAACAACA GATAGCTAAA 1140
GATCCTGGGG GGACTCTTGC AATTGTTTGC ATATTTTGTG GTAAATATTT TAATTAAAGT 1200
ATACTGAACA ATGACTTCAA GTGACCCTCC CACAGTGCTG CTGGGCTTGG CTCTTCCTTC 1260
AGTGGAGCAC AAAGGACAGA ACAGATAGTG TCTTCCCAGG AGGGTAACCT AACACATCTT 1320
TTTCTTTGTT 1330