EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-22024

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr4:135590580-135591860

Target genes

Number: 20
Name	Ensembl ID

Gm12989	ENSMUSG00000083678
Gm12988	ENSMUSG00000082743
Srsf10	ENSMUSG00000028676
Pnrc2	ENSMUSG00000028675
Cnr2	ENSMUSG00000062585
Fuca1	ENSMUSG00000028673
Hmgcl	ENSMUSG00000028672
Gale	ENSMUSG00000028671
Lypla2	ENSMUSG00000028670
1110049F12Rik	ENSMUSG00000028669
Gm13007	ENSMUSG00000083852
Gm13008	ENSMUSG00000085714
Tceb3	ENSMUSG00000028668
Rpl11	ENSMUSG00000059291
Gm13009	ENSMUSG00000082877
E2f2	ENSMUSG00000018983
Zfp46	ENSMUSG00000051351
Hnrnpr	ENSMUSG00000066037
9130020K20Rik	ENSMUSG00000086568
Kdm1a	ENSMUSG00000036940

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr4:135590774-135590785	AAGCAATAAAA	+	6.32
HOXA13	MA0650.2	chr4:135590952-135590963	ACCAATAAAAC	+	6.32
NFE2	MA0841.1	chr4:135590923-135590934	GATGAGTCATT	-	6.32
Nr5a2	MA0505.1	chr4:135591026-135591041	CAGCTCAAGGCCAGT	+	6.07

Enhancer Sequence

CCTGAGGCTG TCATGACAAA TACTATTTAG GCTTCTCGTG GTGCCTGCAC CCTATCACAG 60
TGTTCTGTGC CAACTTCCAT GTTGAAGAGA ACAAACACTC CATCTCAGAA CGAAGCTGTT 120
TAACAACTCA GTAGCTTCAG GAAGTCCCTG AAATTGACCA TAGTCTATAG CACTATTCCT 180
CCCCAAGCTT ATAGAAGCAA TAAAAATGGC AGAGTGATAT TCTCAGAAAA GCCTAGGCAC 240
CTGAAGAAGG CTCTCCCCAA CCTTCCCAGA TGCCTACAAG TTGTGCTGTA CACCCCAGAT 300
TTCTAGAACT GTGATCCATG CTATGGTGGT CTTTGGTGTG GCAGATGAGT CATTTCTGCT 360
CCTGTAAGTA ACACCAATAA AACTCATTGG TACCTAGGAA TGGTGGCACA CGCCTTTAAT 420
CCGAGCACAC AGGAGCCAGA GGCAGGCAGC TCAAGGCCAG TCAGGCAACA TAGTGAGACC 480
CTGTCTCAAA AAAAACAAAA CCAAACAAAC AACAAACCTA ATTTCATCAG TTCACTTAGA 540
CGGACTTGGG AGCTTCCCTA TTTCTGTAGT CAGTTCCCTA TCTGAGGTAA GCAGACATTT 600
ATTCATGTCC CCCATAAACA GTGTCAACAG CATTGGCCCC TCAGTGCCTC AAGCTTCACT 660
TCTGCCTGTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTAA CCTCCTACTC TGTTCTAGTC 720
ACTGGACAGA CTTGAACTTC AACCCTGCCC CGCTGTAGCT TCAGGATCTT TCTGTCAACC 780
CCAGATTCCA GCATCAAGCT CGGCAGCCTC AGCTTGTGCA TTGCATCCCT TGCTTTGAAA 840
AACCTTTACT CAATTCTAGC CTCCTGTGGG CTCCCTGAGT TCAGGGACTG TGACTAAGCC 900
TTCTTGGTAG CCATGGTAGA GGGATTAAAC AAGTGTTTGG GGAATCCACA AATGAACACA 960
CTTGGATAGG TCTAGGACAG GTCTGTGCAG AGGCAGGGAA CTGAGGAGTG TGGTAAAGCC 1020
ATAGCTTCGG AAAGCTTAGG ACTAGCCCCT CAACAATGGG TTTGTGCATG CAGATGAGTG 1080
CTAGAGTATT TGTCTAGCAT GGAGGGCAAT GGGTTTGATC CCTGGACTAC AGATAGGGCC 1140
ACTCCTCTCA CTAATTAGTC AGGTAGCTTT GTAAAATCCA AGAGGCAAGC AGAGACATAC 1200
AGAACCCGAG GAAGGGGTAA CAGCCTTCTC CCTGGAAGAG CGGACCTGCC CTGTGAACGC 1260
AGCAGGAAGA GCAGATGTGT 1280