EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-21882

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr4:132179690-132181140

Target genes

Number: 30
Name	Ensembl ID

Epb4.1	ENSMUSG00000028906
Ythdf2	ENSMUSG00000040025
Gmeb1	ENSMUSG00000028901
U11	ENSMUSG00000077323
Taf12	ENSMUSG00000028899
Snhg12	ENSMUSG00000086290
Snora16a	ENSMUSG00000065097
Snora44	ENSMUSG00000064604
Snora61	ENSMUSG00000064949
Snord99	ENSMUSG00000080615
Trnau1ap	ENSMUSG00000028898
Gm17300	ENSMUSG00000091021
Snora73b	ENSMUSG00000065353
Snora73a	ENSMUSG00000064387
Rcc1	ENSMUSG00000028896
Snhg3	ENSMUSG00000085241
Phactr4	ENSMUSG00000066043
Med18	ENSMUSG00000066042
Sesn2	ENSMUSG00000028893
Gm12999	ENSMUSG00000087352
Atpif1	ENSMUSG00000054428
Dnajc8	ENSMUSG00000054405
U6	ENSMUSG00000065623
Eya3	ENSMUSG00000028886
Xkr8	ENSMUSG00000037752
Rpa2	ENSMUSG00000028884
Ppp1r8	ENSMUSG00000028882
Stx12	ENSMUSG00000028879
Gm13033	ENSMUSG00000083816
Fam76a	ENSMUSG00000028878

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxj3	MA0851.1	chr4:132180952-132180969	AATTTTGTTTATTTTTA	-	6.15
NFE2L1	MA0089.2	chr4:132180391-132180406	TCTGCTGAGTCACTG	-	6.56
Nfe2l2	MA0150.2	chr4:132180354-132180369	TGCTGACTCATGCAG	-	6.45
Nfe2l2	MA0150.2	chr4:132180393-132180408	TGCTGAGTCACTGCT	-	6.53

Enhancer Sequence

CAGTTTCCCA ACTAATGCAC CCAGGTTACA TTCTTTTTAT TATTTTATTT AACTATTTTT 60
TTTTAAATCA GTGTCCCTTT ATGTAGCCCT GGCTGGCCTG AAACTCTCTA TGCAGACAAG 120
GCTGGCCCTG AATTTACAGA GACCCAGCTG CTTCCTGCCC TCAAGTTCTT GGATTACAGG 180
CATGTGACAC CATTCACACT TGAAACAGAA ACTTATAGTT TCTTTGGGAA GTCAGTTGTG 240
TTGGATGGTA TTTTGCTGGG GCAAACACAT GAAAGACTGC ATGGTGTTAA GAAGAACCCA 300
ACAGACAGCA GACAACACTG GATGGTGCTG GTATGCCTTG CCATTCCTGA ATGGTCATCG 360
TTGGTCATGA TTTCATAGAC ACCAAAGAGC TTCTGGCGGG TTCTGGTGGC TTCTTGCCAC 420
TTCCCCGGAC TCTGGCTGAT TGATATCAGC TGATACATGT GGTGCTGTGG TGCTTTGCTG 480
AGGCAAGACT GTGTGAAGAC CTGTGATGTT TGGCGGGAGT ATAAGTAGGA CTCAAGAGAC 540
AATGACAGGG GCTTGCATAG CTAGCTTTGC AATGCTCACC CCTTTGTCTT CACTGATCTG 600
CTCTTTGTTG AGAGAGGCAC TGCAGAGAAC TGCTCCTGGT ATCTGTGCTG GTCCTGGCTG 660
ATCCTGCTGA CTCATGCAGA GTCAGTGGAG GCCTGGCTGT TTCTGCTGAG TCACTGCTGC 720
TGCCACTACT GCTGCTGCTT TGTGTTCGTT ATCCTGACAC CACTGAAGTA GACTCTTGGT 780
ATCCTGACAA GTGCCCCAAA GAATATTTCT TTTTTTTTTT TAAGATTTAT TTATTTATTA 840
TATGTAAGTA CACTGTAGCT GTCTTCAGAC ACTCCAGAAG AGGGCGTCAG ATCTCATTAC 900
AGATGGTTGT GAACCACCAT GTGGTTGCTG GGATTTGAAC TCAGGACCTT TAGAAGAGCA 960
GTCGGTGCTC TTAACTGCTG AGCCATCCAG CGAATATTTC TAAACACGTC TACTTCCCCC 1020
ACATCCTAAT AATCTTTCCT TTCCACTACC TCTGGTGGAT AGAGGCCTAG AAGGGTGGTT 1080
AAAGCATTTA AGAACCCCTA TTAAAAGTAG GATTTGAAAA ATATAAGCCT ACACATACTC 1140
TAATTTTTTG TGTGTGGTGT GTATGTATGT GCTATGTGCG TGCGTGTGCG TGTGTGTGTG 1200
TGTGTGTGTG TGTGTGTGTG TGTAAACCAA AGGTCCATGT CTGTTTTTAT TACTCTTTAT 1260
TAAATTTTGT TTATTTTTAA AATTTCATTT CATGTGTTTA GGTGTGTTTT GCTGCATGTA 1320
TGTCTGTACA CCACAGGCAT ATAGTACCAT CAGAGGCCAG AAGAGAGCAC TAGGTACCTT 1380
AGAACCAGAG TTATAGATGG TTATGAATCA TGACTTGGAT GCTGGGAACA GAACCTGGGT 1440
CCTTAACTAG 1450