EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-19685

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr3:89897320-89899360

Target genes

Number: 28
Name	Ensembl ID

Shc1	ENSMUSG00000042626
Pygo2	ENSMUSG00000047824
Adar	ENSMUSG00000027951
4632404H12Rik	ENSMUSG00000042579
Ube2q1	ENSMUSG00000042572
She	ENSMUSG00000046280
Il6ra	ENSMUSG00000027947
Atp8b2	ENSMUSG00000060671
U1	ENSMUSG00000065045
Hax1	ENSMUSG00000027944
SNORA58	ENSMUSG00000077569
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
Gm16540	ENSMUSG00000090005
Tpm3	ENSMUSG00000027940
Nup210l	ENSMUSG00000027939
Rps27	ENSMUSG00000090733
Rab13	ENSMUSG00000027935
Jtb	ENSMUSG00000027937
Slc39a1	ENSMUSG00000052310
Crtc2	ENSMUSG00000027936
Dennd4b	ENSMUSG00000042404
Gatad2b	ENSMUSG00000042390
Slc27a3	ENSMUSG00000027932
Ints3	ENSMUSG00000027933
Ilf2	ENSMUSG00000001016
Snapin	ENSMUSG00000001018
2500003M10Rik	ENSMUSG00000001017

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr3:89897903-89897918	AAGATCAAAAGTTCA	+	6.25
Nr5a2	MA0505.1	chr3:89897911-89897926	AAGTTCAAGGCCACA	+	6.67
Nr5a2	MA0505.1	chr3:89897487-89897502	GCTGTCCTTGAACTC	-	7.06
RARA	MA0729.1	chr3:89897903-89897921	AAGATCAAAAGTTCAAGG	+	7.2
Rarb	MA0857.1	chr3:89897902-89897918	GAAGATCAAAAGTTCA	+	6.45

Enhancer Sequence

AAAGCTAAAG CTGTTGTTGA GCTGCACATA GTAAAGGTCA GGGTGCACAT AGTAAAGGGA 60
GGGGTGCTGC TGTCACGGTG ACCTCCAAAT TAGAATTTTG AGCTCTTTGT CTTTTTGAGT 120
AAGTTTTACA CTAGCCCTGG ATGTCCTAGA ACTCAGTCTA TGCCCAAGCT GTCCTTGAAC 180
TCACGGCAGT CCTTCCTCTG CCTCTCAAGA CAGCACCACC AACTGTACTG TATGAGGTGT 240
GTTCATTGTG TTTGGTTTGG TGGTGCAGAA CTCTGAACCC AGAGCCTTGA GCTCCATCAC 300
CAGCCCCAGG ATTGGCTTTT CATGAGCAGA ATGCAGTTTA GAGGTAGTCA AGACTCAGTA 360
TTCCAGCCAC AGAAACACAG AGTGAAGAAG CTTAGCTAGG GAGGAACACA GTAGCTCTGC 420
AGGTTTGTGG GCAGGATGGT TGCCGAAGCT TTGTCCTTGT CAGATAGCTG AGGGAGACGC 480
CACTGTAGTT TATGAACTAG TGTGTGCTCC GAAAAGAATG AAAGTTGTTG CATCTGGGCA 540
TGGTGGCTAA GCCTGTACCC AGCATTCTGG AGACTAAGGA AGGAAGATCA AAAGTTCAAG 600
GCCACACACA CTAAACTACA TAACAAGACC CTGGGTCAAA AATAATAAAC AAGGCTGGGT 660
GTGGTGGTAT ATGCCTCTTT AATCTCAACA TACGGATCTC TGACTTCGAG GTCAGTACTG 720
TCTATATAAC AAGTTCTGGG CCAGCCAGTA TAGTGAGATT CTTTTAAGAC AACAACTTTT 780
ACTGGGTGGT ATACGCCTTT ATTCCCAGCA CTTAGAAGGC ATATATGAGT TTGAGACAAG 840
CTTGGTCTAC AGAACCAGTC CCAGGACATC CAGGGCTACG TTGAGAACAC TGCACAAAAA 900
CAAAAAACTT TTCCAAGTAA AAAAATAGTA TATTTGGTAT GTGTATATAC ATATATATTG 960
GGTTGAGTGT TCTGGCCCCA AGTTACAGAT GTTTGCGTAT CATTGTACTA GCTAATATTG 1020
GTCTGCTATC TTTGTTTTCA AATCGACTCT TGCTTTTAAA ATGTTTTAAA GTTCACAAGA 1080
TAAACAGTAA CATGCACACA CCACTAACCA AGAATATGCT GTACTTCGGG AAATGCTAGA 1140
TTAGGCTGCA GATTTCTCTA TTTTTCTGAG CCAGGGTCTC ACTGTGTAGC TATGGCTAAC 1200
CTGAGACACA GCAGTCCTCT AATCTCAGCC TCCAGTGAGC TGGGTAACAG GCATGCACAG 1260
CCCTGCCTGA TAAGATAAAC ACTTTGACAA CTAAGTGTGC AGAGGTAAAG TTAGGTAACT 1320
GGTTTTGAGA CTGAGAAAGT GATTTCATGA AAGATGGTAG GGAGCTAATG TCCTGGCTTG 1380
GAATTTGGGA AGCAGGAGAA GCATATGTCT GAGAAACTCG TGGTCAACGA GGGGAGGAGC 1440
TGATAGAAAT TTTGGAATCC AAACGGTATT TTAAGGGTAT ATCCAAGGTA TTTTAAGTTA 1500
TAAAGATGCT AGTCATAGTG CTACATTCCT TTAACCCCAT CACCCGGGCA GAGGAAAGCC 1560
AGTCTACATA GTTCAGGACA GCCAGTAGTA CAAAGAGAGA CCCTGTCTGA AAGAAAGAAG 1620
TGAAGAAAGA GAAAAAAAAG AAAGCAAAAT CAACCACTGC AGGCGTGGAA AGGTTAAATA 1680
CAGAGAAAAG CTAAGTTGGG CAGGAAGTCA AAGGAACTTG TTTGAAGGGA TAAGGGATAG 1740
AGGAGAGGGA GGGGCAGCTC AGGGCCGAGG GGTTCTCGGC TCCAGCAGAC AGACTGAGAA 1800
AGAGGGAAGT GCAGTTGGGC ATCCACGGCT CAAGTAAGTT GAGAGTGTGT TGGGAGCATT 1860
GGGTTCAACT GTAGGCAGAT ACCATATTCA AGGAGAGGGC ATTAGTGAAG GAAAGCAGTA 1920
ACCACACTTG AAAGTGCTCG TGCCCGGTAG AATCTGGCCA CTGAGGTCAG GTATCAGCCA 1980
CTTGTTTCTG TGGCTGTTAA ACATGTCTTG TGGTGAGGCT AGAATTCAGC TTTATTTATT 2040