EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-03504

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr10:127040980-127042200

Target genes

Number: 20
Name	Ensembl ID

B4galnt1	ENSMUSG00000006731
Dtx3	ENSMUSG00000040415
Pip4k2c	ENSMUSG00000025417
Dctn2	ENSMUSG00000025410
Gm20492	ENSMUSG00000092593
Mbd6	ENSMUSG00000025409
Ddit3	ENSMUSG00000025408
Gm4189	ENSMUSG00000092384
Arhgap9	ENSMUSG00000040345
Gli1	ENSMUSG00000025407
R3hdm2	ENSMUSG00000025404
Ndufa4l2	ENSMUSG00000040280
Shmt2	ENSMUSG00000025403
Lrp1	ENSMUSG00000040249
Stat6	ENSMUSG00000002147
Gm16229	ENSMUSG00000085731
Tmem194	ENSMUSG00000040195
Gm16230	ENSMUSG00000087163
Zbtb39	ENSMUSG00000044617
Ptges3	ENSMUSG00000071072

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIA	MA0670.1	chr10:127042047-127042057	ACTTGGCACC	-	6.02
RREB1	MA0073.1	chr10:127041515-127041535	CACCAAACCAAACCAAACCA	+	6.13

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_01688	chr10:127014887-127042208	Macrophage
mSE_03186	chr10:127027322-127053147	TACs
mSE_07227	chr10:127039509-127042816	Intestine
mSE_08371	chr10:127036093-127043062	Liver

Enhancer Sequence

AGGCCAGGGC AGAAGTTGAG AAGGTTCCCA GGGGGCACAT CATAGCCACC TACCCGGTAT 60
ACCCATGTCT GGCCCCGAGG CAAGGCTGCC ATTGCTAACC CTCTTTGCCC AAGCACGCCT 120
GTTGAGTGGG ATGGTGAACT AGAAACACAG GCAGGGTAGT TGTCTCCAGT CTCAGCACAC 180
AGGGCTCCTT GAGCTACCTA TCCCAAAGGT GTCTGGCAGT TCTCTGCTGT GCGCTCCAGA 240
AGGACAGACA CCCAATCACA GGTGAACCTT GGACACTGAT AACTGCAGAG CTAGAGGTTG 300
ATGTCTGAGC AGTATCCTGA GGCCACAGAG AGGAAGATTT GCTCTGTTTT CCACCATCGC 360
CCTCTCTCCC ACCCCTGAAA GGACCCTCAA TCAAACTGAA TCCTTTATAA CCTCATGGGA 420
CCTTGGCTTT CTTCGAGGGA GCCTCACAGG CCTAGAAGAA GAGCTTACAG ACCTACTACA 480
GGAGCGGGGA TCTAGCCAGC CGTAGGATGC CTGCTTAGCA TCTGTCAGCG AGCACCACCA 540
AACCAAACCA AACCAAACCA AACCAAACCA AACTAAGAAC CAAAGGCTAT AGGATCCACA 600
GTTCATTGCC CTCAGCCTCA TTAGCAAGGC AATCTTTACC ACCAGTTTGC ACTTTATCAG 660
ATCTGGACAG AGTAACAACA GCCCATTACG CAGTTTAGGG AACTAAGTTG TGGTGGGGAG 720
CTCTGGTTTA CTCAAGGTCA GAGATCTATG TCTGAGGGCT GGGGACAGAT CAACCACAGG 780
CCAGACCCCT CCCGGCAGCC CTGTGTGGCT TTTCGGGGAA TGTGACTCGG CCAGCTGTTG 840
ACTCTGAAGC AATTACTGTT TGTTTGTGTA ACAGCACGAG AGGGGATCTG CACCCAGCCA 900
TGCGTGAGTC CAGCCTGTGA CACCCTTCCT CACGCTTAGA CAGCAAAGTT GCCTCGGAAG 960
AGAAGAGAAG CCTGCATGGG AATGGCCAGC ACATCCTAAA TGCTCCAGTG GCCCGTGGTT 1020
CGTCCCTTCG TCTCATTGAC TGCCACAGAC AGGAAGTAGG CTCAGGGACT TGGCACCTAC 1080
CCAACAGCAG GACGTCCTTT CTGGCCATAC TCCTGAGGGT AACAAAATCA CATGGAAGCC 1140
CAAAGCAAGC CAGGCTCAGG CTCCTCTGCC CTCTGCTACT TAACAATGTC CGTCCTTCCC 1200
CAGCCCCCCT GCAGATGCTT 1220