EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-01829

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr1:180312260-180313170

Target genes

Number: 6
Name	Ensembl ID

Pppde1	ENSMUSG00000026502
B230369F24Rik	ENSMUSG00000086350
Fam36a	ENSMUSG00000026500
Gm16586	ENSMUSG00000089788
Hnrnpu	ENSMUSG00000039630
Efcab2	ENSMUSG00000026495

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:180313129-180313140	TTCTTTGTTTT	-	6.62
YY2	MA0748.1	chr1:180312728-180312739	AAATGGCGGAC	-	6.14
ZNF263	MA0528.1	chr1:180312744-180312765	AGAGGAGGGTGGAGTTGAGGG	+	6.15

Enhancer Sequence

TTGCAGGCCT GTACACACAG CAATGAGGTA ATAGTTGACT TGGGTCCCTC TCAAATATAT 60
GAATAGAATA TTGGCAGCTT GAATAACAAT GTCTTTAGAG TCAAGATCAA AATCCTAACT 120
TCAGACTCTC TGGGCTGTTT GTTGCTTAAC AGTGGGCATG TCCTGACAGC AAAGCCCAGC 180
TGACAGAAAT GAGCTTCATG TGCAGTAACA TGTGCACTGT GTATCTGCCA ACAATCTCAA 240
AGCTGCAAAC CTCAAAAATA ACCCTGGAAC ATAAGTTGCT GTCATTATCC TCATTTTAAA 300
GATAAGGAAG GAGAAGTTAA ATTAATTGCC TAAGGTTCCA TAGTAAATAA GTGGCAAACC 360
AGAACCCAGG AGTCTGGCTA CAGGTTTTAA CCACAGATAG AAAGCTCTTA AGTGACTGTT 420
TACAATGAAG CTTATCTTTC TGAATTTCTA TGCCTGTCGC TAATGGCCAA ATGGCGGACA 480
CAGCAGAGGA GGGTGGAGTT GAGGGGACAG TCTGAGAAAA GCAATGCAGT CTAAAACCAT 540
TCAGGACTCC TCTTCACTGC AGTTTCAGGA GAAGCATTGA GGCAGGGCAG AGTCACTGGG 600
CAGGAAGCTG GGAAGTTGTC TCTATACCAG TTTAGAAAAT GTATGAGGGA TTGGTGGGAT 660
GGCTCAGTGG GTAAAGGTGC TCGATGCCAG AGTTCCATCC CTGGGTCCCA TATGGTGAAA 720
GGTGAGAACC AGTCCTCTGC ATAGGAGCTC TGCAAAGTCA CATGTGGCAA GAGTTTATAG 780
CCACCAGCCC TCACTCTCTA AAATAAATGC ATTAAAAAAT AAAATCAAAG AATAGAATGT 840
GGGGGGCTGG CTGGTTGACT CATTTTGTTT TCTTTGTTTT GATTTTGGTG CTGGCAATCA 900
CTACATTGAT 910