EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-01232

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr1:140739820-140741110

Target genes

Number: 4
Name	Ensembl ID

Lhx9	ENSMUSG00000019230
2310009B15Rik	ENSMUSG00000079283
Dennd1b	ENSMUSG00000056268
Gm16305	ENSMUSG00000085361

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:140740474-140740492	GGAAGGAAAGGAAGAAAG	+	6.06
ZNF263	MA0528.1	chr1:140741067-140741088	GGAGGAGGAGGAAGAGGAGGG	+	10.87
ZNF263	MA0528.1	chr1:140741070-140741091	GGAGGAGGAAGAGGAGGGGTC	+	7.38
ZNF263	MA0528.1	chr1:140741064-140741085	CAAGGAGGAGGAGGAAGAGGA	+	7.39

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05968

chr1:140739763-140741075

E14.5_Limb

Enhancer Sequence

CCTTGACCGT GGAGCGGGTT ACTCTTTTAC CTAATTCTAG ATTGAAGGTA AACTTGGAAT 60
TCTAGAGTCC CCTTTGGAAT TTGTCACCGT GCACAGGTCT TGGGTGAGCT GGATGCCCGA 120
CTAGGGTAGG ACGACGAGGC AATAGCCGCT AGTGTTCCAC ACACTTAGAA GGGTGTGAAA 180
GAGGCTCTGG GTGGAGGCGG GGAAGTGAGA ACTAACAGGC AGGATGGCAG ACTGCTCCTC 240
ACAAGAGATG GTATTGTTCT GTCGCCCTCT GTTCTAGTTA GCTCGGCCCT TCCCCTCCCT 300
CTGGACCCAT TAAAACGTGT CCACAATACC GCAATACTCT GATATTGTGG ATTCACTGAA 360
ACGACCACGG GGTGGGGGTG GGGGGAGTCC TAGGATCGTG ATGCCAGGAG CAGCGACGGG 420
AACTTAATCC GAAAGGGAAG AAAGCCTGGC CGCTCCCGCT CCTCTCTGCC TGCTCGCCAG 480
TCTCGGCTTC ACCACCACTT CTCGGGCTTG CGGGCGAGCA TCGGGGCTTC TGTCTAGAAA 540
GCTGGAGAAG CACCCCGCGG CACCGCCGCC TCCCTCCACC CAGGCGGCTC CACGTGGAAC 600
TTTAACCCAA TCTGGAAGGA AGGCTGAGGA GAAGAAGCTG GGGAAAGGGG CTAGGGAAGG 660
AAAGGAAGAA AGAAGAGAAT AAAGGAACCG TGTGAATGAG AGGGGGACTT AGGAAGAAGA 720
GAGCGAAGGA CGTGAAAGTG GAAGGAAGAG TCGGAGAAGA AATGAAGAGG AGGAAACGAC 780
TCCCAGTGCT GCAGCCTAAC TTCCTGTCCC AAAGCTTCAC TTTCTGGGGC TCCTGGGGTC 840
GCTTCTTCCT GAAACTCAAG TCTCCACTAT TTCCCCACCT TTTCCCCTTT CTGGGTCAAA 900
ATAAAGTTAT TTGCAGAGTG GGCGCTTTTA GGGTCCTCTG GGTGCCAGAA TACAGCTCAT 960
AAAACACAAT TTCACACAAA AAAAATGAAG CCAATCAAGT GAACTAAGCT GGAGAAGTCC 1020
CCCCTCCCCA TTTTGGCAGC CCTACCTGAC AGCAGGACGG CTATTTACTG TAAGTAATGT 1080
AATTAGCCCC TTTGGATGGA AATCAATGAG CTCTCTAAAC CCACGTGCAC ACAAGAAGGG 1140
CCTCAAGGAG GGGCTGGGTC AGGGGCCCTT TCAGAGACAG CAGGTCTGCT CACAAAGGGG 1200
CAGATTGCCT TCTTACAAGT CAGCAGTTAA ACTGACTCAG AGCCCAAGGA GGAGGAGGAA 1260
GAGGAGGGGT CTACCCAAGG AACTAGTCAA 1290