EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-00735

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr1:89659140-89661360

Target genes

Number: 10
Name	Ensembl ID

Gigyf2	ENSMUSG00000048000
Gm6153	ENSMUSG00000090994
Inpp5d	ENSMUSG00000026288
Atg16l1	ENSMUSG00000026289
SCARNA6	ENSMUSG00000087968
Scarna6	ENSMUSG00000089281
Sag	ENSMUSG00000056055
Dgkd	ENSMUSG00000070738
Usp40	ENSMUSG00000005501
Gm5832	ENSMUSG00000084021

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:89660061-89660075	GGCCACGCCCACTT	+	8.12
Klf12	MA0742.1	chr1:89660061-89660076	GGCCACGCCCACTTC	+	6.76
RUNX1	MA0002.2	chr1:89661317-89661328	GTTTGTGGTTT	+	6.02
SP1	MA0079.4	chr1:89660059-89660074	ATGGCCACGCCCACT	+	6.93
SP3	MA0746.2	chr1:89660061-89660074	GGCCACGCCCACT	+	6.92
SP4	MA0685.1	chr1:89660059-89660076	ATGGCCACGCCCACTTC	+	7.59
SP8	MA0747.1	chr1:89660062-89660074	GCCACGCCCACT	+	7.22

Enhancer Sequence

CCCTGGATAC TCTTTCCCTC CCATAGCCAC TCATGCTTTT GAGTCTTTAC CTCAAACTCC 60
TTATTCTGTC CAGTGGTTTA CATTTATTTT GCCGCCGCCT TTCTTTTCAT TCCTAAACTT 120
TGGCTAGATT TCACTCTAGA TTCGACTGTA GTATGGCTAG GCATTGGGGA TAGAGAGGTG 180
AGAGTTAATA AATCCACTTA GTGGGGACAG AAGCCAAACC AGAGACCAGC ACAAAGGGTT 240
GTTTGCTTGG AAACGTGTTA AGAGTACTCA CAGAAGGTAT CAGTCCCTTT GTTTCATTGT 300
GAGTAGAAGG AAGTCACTGG TCCCAAAGCA GGGGCATGGC CTGTCCCTTC TTGCCTTGTC 360
CCTAGCAATT ATAGGTGCTG TTTCTATCTG CAAGTCTCCA CAGCCTGTTG TTCTTGTCTG 420
CAGTCCACCA TCTTAGGAAG TCCTCCCTGT TACTCTTTTT AACCCCTCCT AACCATGTGT 480
GAGGAATGAC TTGATTTTCT TACAGCTTTC ATTTCATGAG ACTTTGTGTT GAATGCTAGC 540
CCATAGATTA GAATACATTA GCTGCTTTGT ACATTCTGTG CTGCTGTGCA TTTGGAGAAA 600
GATTTGGTGA GATACTCTCT AATGACTCAA AGTCATTAAG GATGGCTTTA TACAGGGTAG 660
TGTACTTTTT TGTCTTTTGG TTTCTACTTC TTGGGCTACA ATTAGGGAAG TATCCATTTG 720
CTTCAAAGGG TGAGATAAAT GATTATTTAT GCTTAGATGT ATGATAAGAA TCCAAGTATA 780
AGTAGGTGTT TGAGTTATGT GATATTACTA TGCTATTCTA AGGCAGGGTC TCTATAGCCC 840
TGGCTGTCCT GGAACTCTGT AGAAAAGGCT GGCTTTGAAT TCAGAGAGCT CCTGCCTGGG 900
GTTGGAATTA CAGGCATGCA TGGCCACGCC CACTTCCTTA TGCTGCTGTT TGCAGCACCT 960
CTCATTTTGC AGCGTATCCT AAATCCCAAG GAGCAGCCCT GTCAGTGTGG ATGCTTTAAT 1020
TACTGTCCAG CCTTCTTCCC TTCTTCTGTC CCTTTTTTCA GATCAGAATC ACCATGAATG 1080
AGTACCTAGC TCCTGCCAAG AACCTTTTCT TCAGTTGTAG TCAGCCAAAA TTTTGCAGAA 1140
TCTCTGAAAT AAACGGAAAA TAAAGAGCCA GATCCTGGGA CACTAGTCCT TCAGCTTCTG 1200
GGAGCAGGTA GCCTTTGTCA AAGTGCGTAG TGACCACACC TGACCAGAGC TTTCGGTGGT 1260
TGGTTTTTGT TTGTTTTCCC TTGAGCTTTG GAGAAGAGAT CTTTGGGACT GGCAGGCATT 1320
CCTTGAGGAG AAATGATTAC TTCTGGATCT GTTTGGGTTT GAGTCCAGAT ATTTCTCTGA 1380
TCGGGGTTAG TGGCCCTGGA GGTCTGTTGT GGGGTTTAAG TCTGGGTTTC CACATAGTTT 1440
GTTCTGCAAG CAGCTGTTAA CTGATTAACT TTTATCTCTA CCCATCCACC CTTCTGCCTT 1500
TGTAGTTTAG AGCCTCTCAC TGGTTTTCAT TATAGTCTTG TTTCTGAGAA AATATCGAAT 1560
ATCTGACAAA GTTCCCAAAA CAGAATCGTT GTTGTGGTGT CCTGTACTCC TGCAGCTTCA 1620
TGCACATCTG TGTGCTGACA TTACCTGTGA GCTTTCAGTG TGGATGGCCA GAACAGAATC 1680
CTTCTGTCCT CACCTAGACA TTTTCCTCCC CCAAGTCTTG CCATACAGGT TTGCTGGTCG 1740
CTCAGATCCC AAGCCCTGAG TCAGTCTTTT ATTCCTGTCA GTCTTTGATT CCCCCACACA 1800
CTTCAGAGTG AGTCTAAACT CTCAACTGTC TCCAGTGGCA CCACTGCGAT GTGAGCTGCC 1860
TTCTGTAGTA GGGCTACCCA GTGTCCTGCT AACTGGTCTC ACTGTTTCTG TCCTGTCCTA 1920
CACTTCTCCC CATCCCAGAC TACTAAAACC CTTCATCAGT AAGTGAGTGC CTCCCTCAAG 1980
CCCAGGGCGT GGGAGGCTCA GCAAATGCTA CTTTCTAAGT CTTGGTTCTC CGTCCCTTTC 2040
ACTGACACTG TGCCCTCCCA GGTGTGTAGT GTGCAGCCCC CTCTACTCAG AGAACCCCTT 2100
ACTGGGTAGG GGTGAGTACA TGTCTTGCCC TTTGTTTCTT TCTGGTCACC TTAGTGAAAC 2160
CCAGACTTTT CTACCCTGTT TGTGGTTTCT TTGTAACATG TAGCTTCACA CACTACTTGA 2220