EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM105-00549

Organism

Mus musculus

Tissue/cell

MEL

Coordinate

chr1:74387590-74388310

Target genes

Number: 15
Name	Ensembl ID

Arpc2	ENSMUSG00000006304
Gpbar1	ENSMUSG00000064272
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179
Tmbim1	ENSMUSG00000006301
Gm216	ENSMUSG00000073650
Slc11a1	ENSMUSG00000026177
Ctdsp1	ENSMUSG00000026176
Mir26b	ENSMUSG00000065468
Rqcd1	ENSMUSG00000026174
Usp37	ENSMUSG00000033364
Zfp142	ENSMUSG00000026135
Bcs1l	ENSMUSG00000026172
Rnf25	ENSMUSG00000026171
Ttll4	ENSMUSG00000033257

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYA	MA0060.3	chr1:74387621-74387632	AACCAATCAGA	+	6.62
Nr2f6	MA0677.1	chr1:74388296-74388310	GAGGTCAAAGGACA	+	6.14
POU2F2	MA0507.1	chr1:74387638-74387651	ACATGCAAATGAG	-	6.54
RXRB	MA0855.1	chr1:74388296-74388310	GAGGTCAAAGGACA	+	6.2
Rxra	MA0512.2	chr1:74388296-74388310	GAGGTCAAAGGACA	+	6.19
ZNF263	MA0528.1	chr1:74387856-74387877	GGGGGAGGGGCCAGAGGAGAA	+	6.02

Enhancer Sequence

TGAGGCTCAG TGAAGTACTG AGAGAGAGAA TAACCAATCA GATGAGAAAC ATGCAAATGA 60
GGTAGAATGC ATAACCAATC CGGGTGTGAG ACACGCCTCT CCTAGGCCTA TATAAGCAGC 120
ACCAGTTCTG GGCTGGGGGG TCTTCTTGCC TACACAGTAA ATGCTCTCCC AATAAATGTG 180
TTGCAGAAGG ATCCTGTTAT GGCGTGTACT TTGCTGGCAA GTCGGGCACT CACAAGTAAA 240
AAGAGAAGCC TAGGGGCAAA AAAAAGGGGG GAGGGGCCAG AGGAGAAGAA GGTTTGAGAC 300
AGGGTCTCAG TAGCCTAAGC TGCCCTCAAA TTTCTGATCT TCCTGACTCC ATTAGTATTA 360
TAGCCATGTA CAACTACACT TGGCTGATTG AAAAGTCAGA GATTTGAACC AAGGCTTCGT 420
GTATGTCAGC CAAGCAGTCT ACCAACTAAG CTATGTTTCC AGACCTGTTT TATTTTTTAT 480
TTTTAACCCT TTTTTTGTGG GGAAGGGGAC ACATGAGTTC CAAGCACAAA TATGCTCAGA 540
GGACAGCTTG CAGGAGTCAG TTCTCTCCTT CCACTGTGTG AATCCCAGAA ATGGAAGTGA 600
GGACATATGA CTTAGCTGCA GTCATCTCAA TAGCCTGCGT GCACATAAAT GCACACGCGC 660
ACATGCGTGC ACACACGAAC ACCACAGAGG CTATAGTACT CTGGTGGAGG TCAAAGGACA 720