EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM102-15868

Organism

Mus musculus

Tissue/cell

MC3T3-E1

Coordinate

chr19:42153520-42156190

Target genes

Number: 11
Name	Ensembl ID

Rrp12	ENSMUSG00000035049
Pgam1	ENSMUSG00000011752
Exosc1	ENSMUSG00000034321
Mms19	ENSMUSG00000025159
Ubtd1	ENSMUSG00000025171
Hoga1	ENSMUSG00000025176
Morn4	ENSMUSG00000049670
Pi4k2a	ENSMUSG00000025178
Avpi1	ENSMUSG00000018821
Marveld1	ENSMUSG00000044345
Zfyve27	ENSMUSG00000018820

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr19:42154331-42154347	AAGCTTTCGAGGAAGA	+	6.2
Foxq1	MA0040.1	chr19:42154909-42154920	AATAAACAATA	-	6.62
IRF8	MA0652.1	chr19:42155347-42155361	CAGAAACTGAAACT	+	6.14
IRF9	MA0653.1	chr19:42155346-42155361	ACAGAAACTGAAACT	+	6.5
KLF16	MA0741.1	chr19:42154229-42154240	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr19:42154230-42154240	GGGGCGGGGC	-	6.02
POU1F1	MA0784.1	chr19:42155891-42155905	TATATGCAAATGAG	+	7.08
POU2F2	MA0507.1	chr19:42155892-42155905	ATATGCAAATGAG	-	7.52
POU3F1	MA0786.1	chr19:42155892-42155904	ATATGCAAATGA	+	6.18
POU3F2	MA0787.1	chr19:42155892-42155904	ATATGCAAATGA	+	6.37
Pou2f3	MA0627.1	chr19:42155890-42155906	GTATATGCAAATGAGT	+	6.22

Enhancer Sequence

CATGCATTCG ACGTCATCCT CAGCTAAACG CAAAGGCCTC AAAATAAATA AATAGGAAAA 60
ATAATAGAAC AAAAGCAAGC AGCAAAAAGA GGGAAACAAC AACATCAACA ACAACCAAAA 120
CACAAGATAT CCAGGGGAAA AACGCAGAGC TGGTCCACCC AGATAAGACG GCTTGTTTAG 180
AGGCGATAGA TACTCTACAC CGAGACCTTG AGATGTTAAC GAACGGCACA GATGTGATGC 240
AAGCTCCTTC ATGTTATAGA TGAAGAAACA CAAGCTCGGA AGAAGCCTTT GGGTAAGAAG 300
TTTTGGTGGT GCTGGCAAGG TGGCTCAGTG GTTAAGGGCA CTTGTTGCTC TTGCAGAAGA 360
CCCAGGTTTC ATTCCCAGCT TCACATCATG TTTCACGACC ATCTAAACTC CAGTTCCAAG 420
GGATCCAAAA CCTCCTTCTG ACTTCCGTAG GTAGTGGTCC ACACACATAC CCACAGGCAA 480
GTACTCCATA CAGGTAAACT TTAAAAAAAA ACTTAAAAAA TTACTCATAA CAAAAATTTT 540
GTTGGTGGCT GAGCAAGGGA CAAGAATATA ACCCTCCCTG ACCATGCTGG TTCTCCTTCC 600
TCAGGTTGAG CCTCTGGTTT AGGTCAGACT TATTGATGGT GCTCTCTGAA AACTTGGCAG 660
ACTATAGCAG CTAAGTTAGG GAAAGGAGGA GTCGGTGGTG TCTGGGGTTG GGGGCGGGGC 720
ACTGAACAAG GATTGTTATT GGATGAAAGC AGCGGTCAAG AAAAATGACC GTGACAACAG 780
GAGGGGTTGG AGCAGCCGAG TCCCATCAGA GAAGCTTTCG AGGAAGAGCT AGCCTCCTAC 840
CAAGAGACAG AATTGCCTTA GTTTGGGTCA GCTGTATGCA TTACGTAGTT AATGGAATGT 900
TATCAAAGGT GATGATACAG ATATTTAAAC GCAGAGATTT GAGGAGCACC CGGCTAGCCT 960
CTCTGCTACA CTGGGACCTG TTCTGTTTCC AGTGCAGGAG TCTAGACTAA TCTTCCAGAT 1020
GAGAAGAGAT CACATGGAGT AATTGTTCCA GCTGACCACA GAAACCTGAA CTCAGCAAGA 1080
TGTCGAGGGC ACTGCCCTTT GAGCTGGGGC CCCATGCTAA TGAGTCATGG TTTCATCCGG 1140
CAAAGAAATT ATGGTTGTTT CTGGCCACTA GGTCTTGGAG GTATGTGTCA TCACGCAGTA 1200
AGAGCTGACA TCTTCATATG GGTGGCTGTG GTGTGCAGAA GGCATGCTAA GTATGTATCA 1260
TAGAAAAAGA AGCCACACCA ATAGCATTGG GGACTAGTGG GTGGTAAGAG AATTTTGTAT 1320
TCAAGGATAT CCCATAAGGG AGACAAACAT TTAAGATACC GTTCAGAATA AACAGGGGCA 1380
AACAGAATCA ATAAACAATA GAAATATTTT TCTAATTTTC TAGATCTTTT TATTCACCCC 1440
TTTGTCTTTT CTATATTTAA GCATTACAAT GTTTTCTCAA GTGATAAAAT GCAGACTCAC 1500
AGGCCCGACC TCAAACCTAT TGAGTCCAAT TCTGTGTAGT TACAGCTCGG GAACCTGTAG 1560
TTTGAACAAG CACATCACTA GATTCCCATT TGAAAGTCTG CGGACCGTGA CTCAACCATA 1620
GGGAGACACT CAAAGTTACG ACCAAAGGTT GCCACGGTGA ATAACCAACT GGAAGTCTCC 1680
CTCGCAGGCA CCTGCCTGAT GCTAACAGGA CAAGTGCAGC TTTTCTTCAG AGTCCGGGAC 1740
TGTTCTGTCT GGTGCACGGA ACTAGAGAGC ATCCTTAAAT CCTCGAGGGC CTGGTGCCAG 1800
TCAGCAGCTC CTTTCCTTCA AGCCGCACAG AAACTGAAAC TCTTATCATC AGCCCAGCAT 1860
CAGAGCAGGC TCGGGCTGAG GTCAGTGAGG TTTCACAGCA AATACAACAT TAATGAGAGG 1920
AAGACAAGAA GTTTTCCATA AGAATTTCAA GAGAAAACTC TTTACAGTGG AGTTAAGGTA 1980
TTCTGAGAGC TACAGGCCAT CTTTAGCTTT TCCAGAACTA AATGAGTTCG TGGCAGTCAA 2040
AGTCAAATGA TGATACAAAT TGTAAAAACG CTGGCCACTA ATCCCAGCAC TCTGGAGGCA 2100
CAGGCAGGCA GATGTCTTTG AATTCCAGGC CAGTCAGGGT TATGCATGAG ACCTTATCTC 2160
AAAAGACAAA ATAAAAAACT CCAAATTGAA CATAGCTCTT CAAAACACAC CCACCTGAAT 2220
CTGAAGAGCT GTGTGTATGT ATATGAGTGT GTGTGCATGA GTATGTATGC ATATCAGTGT 2280
ATATGTATAT GACTGTGTGT ATACATATGA GTGTGTGTGT ATATATATAT AAGGATATGT 2340
ATGTGAGTGT GTGTGCACAC GTATGAGTGA GTATATGCAA ATGAGTATGT TTATATGTGT 2400
ATATATATGA GCATGTGTGT ATGACTGTGT ATGTATGTCT ATGAGTGTGT ATATATATAT 2460
GAGTATGTAT GTAATGAGTA TGTGTGTGTG TATGAGCATG TGTGTATGCA TATTTGACAT 2520
TCTGATCTCT CTATGAAGAG AGATAGGGTC TCTCTATGAA GTCTTGACTA GCCTTGAGCT 2580
TGCTGGGTAG ACCAGGCTGG CCTTGCATTC ACAAATATCC TCCTGCCTCT GCTTCCTGGG 2640
TTTACCGCAT GCACCACCAT TCTTGGCTGT 2670