EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM102-11212

Organism

Mus musculus

Tissue/cell

MC3T3-E1

Coordinate

chr15:102072680-102076490

Target genes

Number: 17
Name	Ensembl ID

Eif4b	ENSMUSG00000058655
Tenc1	ENSMUSG00000037003
Igfbp6	ENSMUSG00000023046
Csad	ENSMUSG00000023044
Zfp740	ENSMUSG00000046897
Rarg	ENSMUSG00000001288
Mfsd5	ENSMUSG00000045665
Espl1	ENSMUSG00000058290
Pfdn5	ENSMUSG00000001289
Myg1	ENSMUSG00000001285
Aaas	ENSMUSG00000036678
Sp7	ENSMUSG00000060284
Sp1	ENSMUSG00000001280
Prr13	ENSMUSG00000023048
Pcbp2	ENSMUSG00000056851
Map3k12	ENSMUSG00000023050
Npff	ENSMUSG00000023052

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EN2	MA0642.1	chr15:102073772-102073782	CCCAATTAGC	+	6.02
Foxd3	MA0041.1	chr15:102075795-102075807	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr15:102075799-102075811	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr15:102075803-102075815	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr15:102075807-102075819	GTTTGTTTGTTT	+	6.32
RREB1	MA0073.1	chr15:102073751-102073771	ACCCACCCCACCCCCCACGC	+	7.3
TFAP2A(var.2)	MA0810.1	chr15:102074117-102074129	TGCCCTCGGGCA	+	6.52
TFAP2B	MA0811.1	chr15:102074117-102074129	TGCCCTCGGGCA	-	6.27
TFAP2B	MA0811.1	chr15:102074117-102074129	TGCCCTCGGGCA	+	6.32
TFAP2C	MA0524.2	chr15:102074117-102074129	TGCCCTCGGGCA	+	6.27
TFAP2C	MA0524.2	chr15:102074117-102074129	TGCCCTCGGGCA	-	6.52
ZNF740	MA0753.2	chr15:102075430-102075443	GGGGGGGGGGGGG	-	6.03

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

mSE_05504	chr15:102073582-102075294	E14.5_Limb
mSE_05504	chr15:102075324-102081586	E14.5_Limb
mSE_07009	chr15:102073041-102077694	Heart
mSE_09125	chr15:102073033-102078990	Lung
mSE_09788	chr15:102073025-102075314	MEF
mSE_09788	chr15:102075357-102077676	MEF
mSE_10127	chr15:102069049-102075211	Embryonic_stem_cells
mSE_10127	chr15:102075345-102077707	Embryonic_stem_cells

Enhancer Sequence

GAGTTAACTT CTCTGCTTCT GCTCCATAAA GTTGAAGATT GGTTGGGACT CAGCAGGTAA 60
GAGCACTGGC TGCTCTCCCA GAGGACCAGG GTTCCATTCC CAGCATCTAC ATGGTAGTTT 120
ACAACCATTT GTAATCGCCA GTTCTAACAG AACCGGTTCC CTCTTCCATC TTCCATGGGC 180
ACCAGGCACA AAAATGGCAC GCGAAAATAC ATATAGACAG AACACCATAC ACATTTTTAA 240
AGGGGGCGGG GAGGGGCATA GAACTGAAAG GTTAGGGCTC ACTCCTGACT CTAGTAATCC 300
CAGAGTTCCC CTGGAAGCAG TTGGTGGCGG TGGGGGGTGG GGAGGAGGGC CGCAGATGTA 360
GAGGCAAATG GAGCAGACAG GCTACCTACA GCTGGCACCT GGCTGAATGA CTTAATGTAA 420
GTCATTCCTG AAAGTGCTCT CAGGTCAGAA GAGGAGCATT AGCAGCTGAG TGACCGGCTC 480
AGTGTCGGCT GACTGGGGAG CCAAGGCTCT CAGGGGCGCT GACCATAGCT ACGTGGCGTT 540
TAGTGAAAGA AGCTGTGGAG GAAAACAGGG ATTCACTCAG GCCCTTAGGT CCAGGAGCAG 600
TTTGGGGTGT AGCAGAGGGT CAGGTGACAC TGGGTAAACA GAGCTGAGGG GGAAGGGAGC 660
TGCCCCAGAC CCTTTCCAAG CCTGTCTTCA TTCCTGAACT GCTTCAGAAA ACAGTCATTG 720
TAGTTTATAT GGAGTCCTAG CCAAGGCCCA GAGTTGGGGG AGCCCACACT TTATACAGGA 780
GGCTGCTGAG AGTACAAGCC TGCCACAGGC TGGGAGAGTA TAGGGTTCAC CCTCAGAAGC 840
TCAGGATATC TGAAAACTAT CCAGCCTGCA GGACCTGCTG CCCGAATTTG GAAAAAAGTG 900
GTGGTGGTGG GGGGTGGATC TTGAAGACCT CCAGCGTCCT TCCTCCCATG CCATGTAACC 960
CACCTGGTCA CAAGTCCATA CTGAGACCCA AGGTAGTGAG AGGACAGAAG AGCCTATAGG 1020
TTGGGGGTTC CAGACCAGCT CCACCACCTT ACAAAGAGGG AAGCCTTCTC CACCCACCCC 1080
ACCCCCCACG CACCCAATTA GCATAAGAAT CCTGCTGGAG TTAGATTCCC CCTCAAAAGA 1140
AAGGGGGCGG AAGGGTGCAG GGAGTTTATT CAAGACTGGG GGTGGGGTTG CCTGAATGGT 1200
AGGTGCTGGG AGGTTTGGGG AAGCCTGGAA GGCCTTTCCG GCCCTCACTT TCAGCCCATC 1260
CTGGGGTCCC CACAGGCCTG AGCGTGGGGT GGTACTCTCT CCTGCACTGA CGCCCTCCCT 1320
ACCCACAGAG CGCTGCCTCA TTTCCTCATT TCCTCTCTTG CGCAAGGCCT GGGTGCGGTC 1380
AGGCTGGCAT GGGGCAGGCA GCACCAGCCA ATTATAAGAC GAAGGCCCCA GAGAGCCTGC 1440
CCTCGGGCAG CCTTTCCCAT CCTAATGGCA CCGGCACCCT CTCTCGGCAC CCCTCTGGCA 1500
CATCATCCCC GCCCCCGGTA TCTGAAAGTG CCATGCGATG GCTCTGAGGT CGCTGTGGGT 1560
GGAGGGTTCT GCAAAGCTGG CAGGGTCTTC TGGGTCCCCT CTTCAACACT GAGCTGAGAC 1620
CTCAGCACAG GGACACCGCT CCTGGGCTCA GCAGGGGCCC CTGCTGAGGA GGAGGGGGTG 1680
GGCTCGGGGT TTTCTCCTTT TAAAGCCCAA ATTGCTGAAA TTGAGGAAAT TCCTGGCCAG 1740
GCTGAGCGGA GCTTCAAACA AACTCTTTAT AACCCGCTGT AAACGCTCCC AGCTGCAAGG 1800
CCCAGAGCTT GAGCTGCCTG GACTCACAAT CTAGCACACA ATCTCCTTGA AGACACACAC 1860
TTTTGCAGGC CAACATGACA CAGACGCCAA AGCAGACAGA CCTACAGTGG GCACTGCCTT 1920
AGTTTGGGCT GGACCTTTAA ACAGAGGAAA GCACAAACAT CAAGGCATGA GTGCTCCATG 1980
TTGGTAGATG ACAAGTCACA GAGCTACGGG CTAAACAGCT CTACTACCAA ACACCGCACT 2040
CAGTCAGCAC AACACCAGGA CACTAAAGTT TCCATCCAAA AGCCAGTAAC ACACAATCCT 2100
CCCCTACTTT AAACCACCTT CCCTCTGAGT GTGACAGGGG TGCACTACTG GCCAAACTTA 2160
CTGGCTCAAA CAGAAATGCA AAAATATTGA GCTACCAAGC CCAAAATGTC TCCAGAGGCC 2220
TAAATAAGAA TATATAGTCC CTGTCTAGGA GCCTTACAGC CAACACCCCC ACGCACACAT 2280
ACACATATAC CCAGATATTT CTGACTCAGA TGCCAGCCAA TGTGCCCAGT AGTTCCCCAT 2340
TATACTGGGC ATGGCAAGGT TAAGAATTCA TAGAAACTTG GTGCAATGTA CTAGTTCCAT 2400
CTTCAGCCTT TAAATAGTAC ATCACTTCTT ATCCCACCCA ATCCCAAAGT ACTGTCTCCT 2460
GTTTGATATC TCCCTTTCCA CTATCCCAGT TAAATCTGAG AACTCTGCCC TGGGACTAAA 2520
AAAAAAAAAA AAAAAAAAAA AAAAAAAACT TAACTTGTAA ACAGCGCTGC TGAGTGCCAA 2580
GGAGCGAGGC GCGTTGGCGG GGGCTCAGTG ACCCGGCGTG CGCACTCCCC CAGCGCCAGC 2640
CACCCCGCCC GCTGCCCGCC CCTTCCCAGA GTGCTCCCCC CACCCCCGAG CCTAGGTCTG 2700
CAGTCATCCA TACCCAGACT GCGAGTGCGG TGCCAACCCC CAGTAAATTT GGGGGGGGGG 2760
GGGTGTCCCA GGCTCCTCTC TCAGCCCCTT CCAACAGCCC ACCCCCGCCA GGCACTGTGG 2820
CCCAGGCTTC AAAGCCGCTT CTCATCTGGA CTTTATTTTT ACTGCCTCTC CATCCCCAGC 2880
TTTTTATTGC CGCTCTGGAA AGGGGTTCCT GGGCCCCAAG CCTGGCATCT CCCATTACAG 2940
AGAGGGGGAA GATGGATATT TGGGGGCCTT ACGATTGTCA TCCCCTACCA GCTGTCACTT 3000
CCAGACCACC CCCCACTCCA AACTTGGCTT TAAACTTTTC GCTTCCTGCT TAAGTGGTGT 3060
TGGAGCCACA GAAAAAGTCA TCTGTCAAGA CAACAGAATA CATACACAGT TCCAGGTTTG 3120
TTTGTTTGTT TGTTTGTTTT TGTTGTTGTT TTAATGAGGA TGAACAGAGA ATCCAGCTTT 3180
CTCACTCTTC TGTGCACACC CTTTGCACCC CAAAAGCAGA GCATACAGGA TGCACTCTAG 3240
GACATAGCAC TTTCCAAAAA CGCCCCCGCA GCCACGCAAG GCACACGCCC TCTCGGCCTC 3300
AAGCAACAAA CATCCCCACA TTGGGCCACG AACATCTGCC AACCTAGGCG GAATGTCACA 3360
GTGCGTGGAG AGACCCCCTA CTCCACACCC ACGTCTCCTA GGTCTGTACA AGCCAGGGAT 3420
TCACACGCTC TGCATTTTTT TTTTAACACT CCCAACTTCC AGCATGGACT TTACAAACGC 3480
TGCCCACAGT GCTGGGTGCC ATAGCCCTCC GAGACTAAGG ACTGGAGGAC ACACTAGCAA 3540
CATACATCGG TCTCTCACCC AAGGACTCTG GAGGGGCATC AACCGAAGCC CTAGCTAAAC 3600
ATCCACCATA AAAACCACAT ATACTCCAAA CACTGCAGCA CACACGCAAA GGAGACGGAC 3660
TCTGGAGGCC CTCGTGTTTA AAGGGCCAGT ACCTCATATA GAAAGGACCA GAATACCCTC 3720
TTGTGCCCTG GTCCCAAACT TTACACAAGG AAATTGTAAG CACCAACCTC TCGTGCACCC 3780
AACACCCGAT CTCCGAGCTC GAATACCTAC 3810