EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM102-06625

Organism

Mus musculus

Tissue/cell

MC3T3-E1

Coordinate

chr11:120429620-120432830

Target genes

Number: 30
Name	Ensembl ID

Slc38a10	ENSMUSG00000061306
Bahcc1	ENSMUSG00000039741
Actg1	ENSMUSG00000062825
2310003H01Rik	ENSMUSG00000025384
Nploc4	ENSMUSG00000039703
1810049H13Rik	ENSMUSG00000039670
Ccdc137	ENSMUSG00000049957
Arl16	ENSMUSG00000057594
Mrpl12	ENSMUSG00000039640
Slc25a10	ENSMUSG00000025792
Ppp1r27	ENSMUSG00000025129
P4hb	ENSMUSG00000025130
Arhgdia	ENSMUSG00000025132
Alyref	ENSMUSG00000025134
Anapc11	ENSMUSG00000025135
Npb	ENSMUSG00000044034
Pcyt2	ENSMUSG00000025137
Sirt7	ENSMUSG00000025138
Mafg	ENSMUSG00000051510
Pycr1	ENSMUSG00000025140
Notum	ENSMUSG00000042988
Aspscr1	ENSMUSG00000025142
Lrrc45	ENSMUSG00000025145
Rac3	ENSMUSG00000018012
Dcxr	ENSMUSG00000039450
Cbr2	ENSMUSG00000025150
Rfng	ENSMUSG00000025158
Gps1	ENSMUSG00000025156
Dus1l	ENSMUSG00000025155
Fasn	ENSMUSG00000025153

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MAFF	MA0495.3	chr11:120429838-120429853	CTGCTGACTAAGCAT	+	6.56
MAFF	MA0495.3	chr11:120429838-120429853	CTGCTGACTAAGCAT	-	6.64
MAFG	MA0659.1	chr11:120429835-120429856	GTCCTGCTGACTAAGCATTTC	+	6.54
MAFG	MA0659.1	chr11:120429835-120429856	GTCCTGCTGACTAAGCATTTC	-	6.79
MAFK	MA0496.2	chr11:120429836-120429855	TCCTGCTGACTAAGCATTT	+	6.52
MAFK	MA0496.2	chr11:120429836-120429855	TCCTGCTGACTAAGCATTT	-	6.9
Nr2f6(var.2)	MA0728.1	chr11:120430674-120430689	AAGGTCCAGAGTTCA	+	6.32
Nr2f6(var.2)	MA0728.1	chr11:120430972-120430987	AAGGTCCAGAGTTCA	+	6.32
Nr5a2	MA0505.1	chr11:120431150-120431165	GAGTTCAAGGCCAGC	+	8.25
Rarb	MA0857.1	chr11:120430971-120430987	AAAGGTCCAGAGTTCA	+	6.42

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_08594	chr11:120432140-120436237	Liver
mSE_11485	chr11:120432130-120443940	Placenta

Enhancer Sequence

GCTATACCCC AAACAAATGC AAGTTCCTGT GAAACAGGGT ATCACCCATC CTGCCGCTGC 60
ATCCCTCTTC TGAGCTGTGC CCGTGAGGCT CAGGATAGGT CAGCCTATTA CTAGAGCAAA 120
ATATTCTCCT ATAGAGAACT GGCTACAGCC TCTGGATTCC AGAAGAGGAC ACCGTGGTAC 180
TCACCGGAGG AAAGACTGCA CACATCTGAA AATATGTCCT GCTGACTAAG CATTTCTCCT 240
CAATCTGTTC GCATTCCCAT ATTTCCTTGA ACACTCTTGT TCAGGTATTC CTACAGTACT 300
CACACAAGAG GCTACACCCC TAGAGATGTG GGGTTAGCCA ACCTCAGTGC TAGCTCTGCT 360
GCCCCAAAAC AGGATTGACT TGACTCTGAC ACCTCCGGTG GGCCAGGTGT TCCTGTCTGG 420
AACTTGCCCT ACCCACTTCC CAGATGGATA TGAACTGGAA AAATATTGTG TGCTTGAGTG 480
CTAGTCAAAG CAGACACGGT GAGAAAGAGA GCCTGCTCCC TCCTTAAGGG AGAGGCTGAC 540
AGAAGACGCC CTCCTCCTGG ACTGTGCCTT TTGGACTAAT CAAGGCACGT CTAACATTAG 600
ATTTACCAGT ACTCTACAGC TTAGTGCCAA CAAGAAGCTG AGCTGCCAGA TTCCAAACAA 660
GACACAGCTC ACTCAGAGAA CCCAGAGCCT CGCTGAACAT CAAAGTAACT GTGGTCATTA 720
AAAACATTTG TTTTGGGGGC TGGAGATGGC TTAGCGGTTA AGAGCACTGA CTGCTCTTCC 780
AGAGGTTCTG AGTTCAATTC CCAGCAACCA CGTGGTGGCT CACAACCATC CTTAATGAGA 840
TCTGAAGACA GCTACAGTGT ACTTACATAT AATAAATAAA AAAATCTTTA AAAAAAATTT 900
TTTTTTTCTT TTTTGTGTAA CCCGGACTGT CCTGAAGCTT GGTATGTGGT CTCAAACTCA 960
GATCCGCCTG CCTCCTGAGT TTCTGGGGTT AAAAAAGTGT GCCACGGGGC TGGTGAGATG 1020
GCTCAGTGGG TAAGAGCACC CGACTGCTCT TCTGAAGGTC CAGAGTTCAA ATCCCAGCAA 1080
CCACATGGTG GCTCATAACC ATCCGTAACG AGATCTGATG CCCTCTTCTG GTATATCTGA 1140
AGACAGCTAC AGTGTACTTA CATATAATAA TAAATAAATC TTTATTAAAA AAAAAAAAAA 1200
GTGTGCCACT ACTACTGACT AAGAAAAAAA CCTGCTTTTT TTTCCTTTAA ATTTTTGACT 1260
GGTGCCGGGC AGTGGTGGCA CACGCCTTTA ATCCCAGCAC TTGGGGGCTG GTGAGATGGC 1320
TCAGTGGGTA AGAGCACCCG ACTGCTCTTC CAAAGGTCCA GAGTTCAAAT CCCAGCAACC 1380
ACATGGTGAC TCACAACCAT CCGTAATGAG ATCTGATGCC CTCTTCTGGT GTGTCTGAAG 1440
ACAGCTACAG TGTACTTACA TATAATAAAT AATGAATAAA TCTTTAAAAA AAAATCCCAG 1500
CACTTGGGAG GCAGAGGCAG GCAGATTTCT GAGTTCAAGG CCAGCCTGTT CTACAGAGTG 1560
AGTTTCAGGA CAGCCAGGGC TACACAGAGA AACCCTTCTC GAAAAACCAA AATAAATAAA 1620
TAAATAAATT TTCCACTGGG GACAGGGGGC CGGAGAGATG GCTCAATAGC TTAAGAACAC 1680
TTGCTACTCT TCTAAAAGGA CCTGGGTCTG GTTGCCAGCA CCTACCTTAG GTGACCCACA 1740
ACTGCCTGTA AGTTCTAGGA GATCCAACAT ACTCTTCTGG AAGAATGCAC AAGATAAACA 1800
AGTATACACT ATGCTTCAGG TGTGCGCATG CACACATACA CAAACCCAGA TTAAACACAA 1860
CACCACCGTA CCCAGTTTAT AAAGTGGTAG TGACTGTAAT TGCGTCTTCA TGTTAGGCAA 1920
GTGCTCTGCC GATCAAACTG CGTGCTTTTC AGATGAGGTC TTACTCTGCA GACCCAGGTG 1980
GCTGAGACCC ACACCAGGAT GGCCTCACAC TTGGACGATG CTCACACCTC TGTTTCCCAG 2040
CTGCTGCTCA CAAGCGAGCC AGTACAGCAA GGTCTGGGCA AAGAGCCTTG GTGGTTTTTG 2100
TTTTTGTTTT TCGAGACAGG GTTTCTCTGC ATAGCTCTGG CTGTCCTGGA GCTCACTTTG 2160
TAGACCAGGC TGGCCTCGAA CTCAGAAATA CGCCTGCCTC TGCCTCCCCA ATGCTGGGAT 2220
TAAAGGCGTG CGCCACAACG CCCGACTTGT TTTTGTTTTT AATTTAATTG ACAGGGTTTT 2280
CTGTGTAGCT TTGGCTGTTT TGAAAGTTGA TCTGTAGAGC AGTAGAGCAG GCTGGCCTCG 2340
AGAGTTCTGC CTGCTTCTGC CTCCCAAGTA ATGGGACTAA GGGTGTGTGC CACCACTGCC 2400
TGGTGGACAG GAACTTTCTA CTCCAATAGT GAAGTCATAT TAAAAAGGAC CACAGATAGC 2460
CTAGGAAGGT GACTAGAGTG GCACACTACT GCTCTCAAGG GGAGATATAT AGATACTTTA 2520
TATGACATAT GTGAGTGTGT ATGTCTGCAT GAGTATATGT ATGTATGTAT CTCTATATAC 2580
CAGGCTAGCC TCAAACTAAA GAGATCCACC AGCCTCTACC CCCAAACGGG AGGATTAAAG 2640
GTCTGTGCCA CCGCCTCCAG CTGAAGCCCA AGTCTTTTGC TTGTAGTAAC TAACTGAATT 2700
GCCTATATCA AGGTCCAGGC TCCACAAAAA TTCCTTTAGC GGTGGCTGGG TGATCCACCT 2760
GGATTTGCAT TTAGTCACCA ACAACTAGAA TGCTGTAACT ATGAAAGGTT CCCAAAGGTA 2820
CAAATGCAGT GAGAATCATG AATACCTGGC CTGGTACTGA CACCCTGTGA GTGACAGCTA 2880
CAAAGCGTCA CCCAAGTGTC ACGCCTACAC TATCTGGAAG CACTGCATTC CTGGAAGCAC 2940
CAATAGTTCA AAGCCCCGTG TGTTGAGCAA AGCACTTGCC TCCTCCTCCT CATTGGTCAA 3000
TCACCAGATA ACTCAGCCAG CAGGCTACTC AGGTCATCAC AGATGTGACA CTTCCTGTGA 3060
AGTACTCCAA AGGAGGAACT TTCCCCAGCT CCCACATGCA AGAGTTGATA TAGAACCCAC 3120
TTGAGAACAG GGCCTCTCCC TGCCTTTTTT CCCCCACCTG TGGGTTTGCT CCCAAAGCCT 3180
ACACAGTTAT TAAAGGGCAG TTCTAGGGTC 3210