EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM102-06199

Organism

Mus musculus

Tissue/cell

MC3T3-E1

Coordinate

chr11:106340930-106343930

Target genes

Number: 10
Name	Ensembl ID

Limd2	ENSMUSG00000040699
Ccdc47	ENSMUSG00000078622
Ddx42	ENSMUSG00000020705
Ftsj3	ENSMUSG00000020706
Psmc5	ENSMUSG00000020708
Smarcd2	ENSMUSG00000078619
Ern1	ENSMUSG00000020715
Tex2	ENSMUSG00000040548
Polg2	ENSMUSG00000020718
Ddx5	ENSMUSG00000020719

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Alx1	MA0854.1	chr11:106343858-106343875	TGAATTAATTAATTAAT	+	7.27
Lhx3	MA0135.1	chr11:106343859-106343872	GAATTAATTAATT	+	6.29
Lhx3	MA0135.1	chr11:106343863-106343876	TAATTAATTAATT	+	6.78
Lhx3	MA0135.1	chr11:106343860-106343873	AATTAATTAATTA	-	6.78
Lhx3	MA0135.1	chr11:106343864-106343877	AATTAATTAATTT	-	6.92
POU6F1	MA0628.1	chr11:106343861-106343871	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr11:106343865-106343875	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr11:106343861-106343871	ATTAATTAAT	-	6.02
POU6F1	MA0628.1	chr11:106343865-106343875	ATTAATTAAT	-	6.02
ZNF740	MA0753.2	chr11:106342538-106342551	CTGCCCCCCCCCC	+	6.33

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01786	chr11:106336514-106344741	Macrophage
mSE_08458	chr11:106340879-106342051	Liver

Enhancer Sequence

AATAAAAAAT ATAAAAGCAA GGCAGGGTTG TTTCTCAGGC TTTAGCATAA ATCAGCAAGA 60
AGTCACACAC ACACAAGCCC AGGGCACCTT CCTGTTTCCT CACCCCCGTT ATACTCTCCT 120
TGGTTCACCT AGACTAATCT GAGTCCCTCC TCTGTGGTCC CAGGGTCACT GCCATGGTCA 180
GGTCCTTCCT GTCATCACAG GCCCACTTTG GTGACAAAAC TGCTTGGGAG GTGGGGTTTC 240
CTGGTGAAGA CTTTGGCAGG GTTGTTAATG AGAACTTTGT CCAGGACTTC TACGACGTGA 300
GTTTTCAGTT TTGATATTTC AGACACATTA CTAGGCAAAA AGTTACTGAA AAACATGCAC 360
CTGCTTGGTT ATTATTAGAC CTTAAAGAAA TGAGCTTAAA CTGCAAATCT GGCCTAGTGG 420
TTTCTTGATC TTCACCCTCT GAAGCTGGGT CAGCCCACTA AAGATGGCCT GTCTCCTGAC 480
GGAGCGTCCC AGATGAAGTG AGGCAGCATG TGTAGCTCAT GCTGAAGCTC CACACTACAG 540
CACAGGGTAG GCGGCCACAG CTCATGTGGG AGGAATAGAC ACATTTAGTA AGTAAGCACT 600
TCCAGCTTAC CAGCAAGCCT ACCCGAGGGT CCTTCAAACC CAGAGCCTCA TGGCAACCTC 660
CTAGTCTCCT CCTCAGACTT AACATAAGCC CCAGGACCAA AGAACTGCAA AGGGCTGGGG 720
TAGTGGACAG CTCTCTGTAG AGAAGCAAGA AGATCAGGTT CAAAGGTTCA CATATAACCC 780
AGGACAGATG ACCAGACTTC CCTGACCCTG GCTTTCTAAC CTCTATCCAG AGGGCAAGGG 840
TTCCGACTGT CACTGAGGGA CCGGCACTGC ACTCTTGATG AACTGGGTCA GATGGCTAAG 900
ACTGAATGGA CCTGTCTTCT ACACTGACCC CAGAAACCCC AAGAGTGTAC ACATTGATTC 960
ATATATGTTA CTGCAGCTTG AAACATTTCT AACATTTTTT GGAAACAAGG ATCCTTTCAA 1020
CGACTATACT TCTGAATCCC CTAAGCAGGA GGAAGTCCTG ATGATCTGAG GGTGGGTCAG 1080
ATTGCAACAC TTTAATAAAC AAGTAAAAAT CTAACCCAAG TGTTTGCAAT AAACTGCGAA 1140
CAAAGTAGTA GCAGTTGTGG TCAAACTGCA ATATGACTCA TGTAGAAGTT GTATTTGGTG 1200
ACGGCTAGAA AGAACTGGGA GCTGTTTTAA GTTATATAAG GATAATTGGT TTAAGAGTAG 1260
ATATATGTAT TTTTAAAAAG ATTCCTTCTT GGTTTAGGGT TATTAAAACT GTTTTGGCAG 1320
GACATCTTAT CCCAGTTAGG GGGGCAGAGA CAAGAGATCA CACAAGTTTG ATTAGGCCAG 1380
CCTAGTCTAT ACTTTGAGTC CCAGGCCAGC CAGCACTACA TAGGGAAATC ATGTCTCCAA 1440
AACAAAACAA AAATTTTAAA GTTATTTTGG TGCATAAAGT TATTATGGTA GCACACACCT 1500
TTAATCCCAC CCCACCCCCA AGAGTAAGAT GTAGGAGAAT CTCTGAGTTC AGGGCCAGCC 1560
TGGTCTACTT AATGATTTCC AGGACAGCCA AGGCTATACA GAGAGACCCT GCCCCCCCCC 1620
CAAAAAAAGT TATGTTATTT TTAAAGTTAC TTAATAGTAG ATAAGTAAAC TACATGATTA 1680
GAAAGTTATA ATTGTTATAA TCAAAATGTT AAGGGGGGGA GACAGATTTG GGGTTTTCTT 1740
TAGGAGGGGA GACAGATTTG GGGTTTTTTT TGGGGGGGGG GGAAGGTTGG TTTTTCAAGA 1800
CAGGGACAGG GTTTCTTTGT GTAGCTCTGG CTGTCCTGGA ACTCACTTTG TAGACCAGGT 1860
TGGCCTCGAA CACAGAAATC CGCCTGCCTC TGCCTCCCAA GTGCTTGGAT TAAAGGCGTG 1920
CGCCACCACT GCCCACGGGA AGACAGATTT GTATAACTGT AAATTGACCC TGAAGAAGCA 1980
ATTATTTTGA AAGTGACACT TATTTCTTTT GAAGAACAGG TTCAGGTATG TTTGTAGAGG 2040
GGGAAAAAAA ACTACCAAAG TAATAAGTTT GCTGTCAACT GGTACTTTCA TCTTCCTAAG 2100
AAAAACAGCT GCAAGGACAA ACCAGGAAAA AGAACAGAAG CCTCTAAAAG GACAATTAAT 2160
ACGTTAGCTC TTGATTTATG AACACTCTTC AGGCGAAACT TTAAATGGTT TCAAAACCCA 2220
GCAAAGGATC TTATCTGCAG GAGACAGGCT GCAATCAGAA CCTAAGTCAC AGGATTACCC 2280
TGAGGTATTT CAGAGCGCTC ACAGGGCTGC ATCTGCTAGA AAGCTGATCT GAAACCACTA 2340
CAGAGCAAAG GAAGCTGTGA AGGAGCTATT TAAAAAGCCA GAATAAAGCA TCTTCTCACC 2400
AACGCTTAGT TACACAGGGG TCAGAGACTC AACCAAGATT ATTTTCATCC TGAAAACATA 2460
AACCAAACAT CTTCATCCAT CTTATAAATC CATGCTTCTA AAAGAAAACA GCTTACTACA 2520
AAGTGGTTGT CATAAAACCA ATTAAAGTTG ATTTTATGCT TTTATAAAAA AAAAAATCCA 2580
ACAGTTGCAG AGATGGCTCA GTGATTAAGA GCACTGGCTG CTCTTTCAGA AGACCTGGGT 2640
TTGATTCCCA GCACCCATGT GGTAGCTCAC AACTGTCTGT AACTCTAGTT CCAGGAGGGA 2700
CTGATATGGC TTCTGTAGGC ACCAGGCATG TAGGTGGTAC ATACACATAC ATGCAGATAA 2760
AATGCCTGTA CACATAAAAT GAAAATAATA AAATTAACAG TAGCTGGGCA TGGTGGCACA 2820
CGCCTTTGAT CCCAGCAGGC AGAGGCAGGC AGATTTCTGA GTTCGAGGCC AGTCTGGTCT 2880
ACAGAGTGAG TTTCAGGACT GCCAGAGCTA CACAGAGAAA CCCTGTCTTG AATTAATTAA 2940
TTAATTTACT GATAAAAAAA CTATCTGTTT CAGTCTAGGG AAGAAAAACA TTATCTATGT 3000