EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM102-00199

Organism

Mus musculus

Tissue/cell

MC3T3-E1

Coordinate

chr1:37640800-37643790

Target genes

Number: 5
Name	Ensembl ID

Inpp4a	ENSMUSG00000026113
6330578E17Rik	ENSMUSG00000026112
Unc50	ENSMUSG00000026111
Lipt1	ENSMUSG00000037216
Mitd1	ENSMUSG00000026088

TF binding sites/motifs

Number: 15

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE40	MA0464.2	chr1:37642936-37642946	GTCACGTGAT	-	6.02
ELK3	MA0759.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV1	MA0761.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV4	MA0764.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
IRF1	MA0050.2	chr1:37643186-37643207	TGCTGGTTTCGCTTCCTCTTT	+	6.04
IRF1	MA0050.2	chr1:37643192-37643213	TTTCGCTTCCTCTTTCTCTTT	+	6.6
Lhx3	MA0135.1	chr1:37643682-37643695	AATTAATTAATTT	-	6.92
NRL	MA0842.2	chr1:37641117-37641130	AATAGTGCTGACA	+	6.11
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	-	6.02
RELA	MA0107.1	chr1:37643129-37643139	GGAAATTCCC	-	6.02
SREBF2(var.2)	MA0828.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
Srebf1(var.2)	MA0829.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
TFEB	MA0692.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
USF2	MA0526.2	chr1:37642932-37642948	TGGGGTCACGTGATTC	+	6.41

Enhancer Sequence

TTTTCCGGTC ACGTTAAAAA TACGTCTGAA ACACCTGCCC ACTTGCTGCA GCTTTCGCTG 60
GCCCCACCTT TGGTAAATAC ACAGCTGCCA CCACCCCTCT CTCTCTCCCC CCAGCTTGCT 120
CTCATTGATT ATTTCTGAAT CGCGGACTCT CTGACAGCTT GGCTATGCCC AGGAAGGCGC 180
TGATTTGCCT CTTTATGGAA GCAGTGTGAT TCTTGGATTG TGACCCTCTC TGGTATAAAG 240
GATCAGAAAG GACTTTGGGG TTTAGCTGCT GGCACAGGGC CTCCTGGAAA AACGTCAGGC 300
ACCCTTGGAG GTGTTTAAAT AGTGCTGACA GGAAAGGACA TCCACCACAG ATTTATAATC 360
TGTACCTTGC TAGGGGCCAA GACCAGCACA ATGTACAAGG AATCAGTTGT TTAAACTAAG 420
CAGGAAACAG ATGCTTTCTG TTAAGCTGCT TATTATCAAA GTACCTGTCA AGCATCCCGT 480
GGTTAGAATG TCTCTGGGAA GCTAGGAGAA CTCCAGGTAC CTGGCCTGCT CTCCTGTCAA 540
ACCCTACATC CCCGCACTGG GCAGTTTCCT TCTGGCATGG AAGAACTACA TGTTTCCCCA 600
TGGGATGAGA GGCTTTGGGA AGAATCCTAT AGGGATGAAG TTTGGTTGCA ATAAAGGTGG 660
AAGACCCATG ACAACAAGTG TTGTATGTAT TTGAGTAACT TCATGTGGGA GCACTGGTAG 720
GTGTGTGTGT ACCTGTGTGT GTGTGCATGT ATGTGTGTGC ATGTGTATGT GTGTGTGTAT 780
GTGTACATGC ATATGTGTAT ATGTGTGTGC CTGTGCTTGT GTATGTGTTT GAATGTGCTT 840
GTGTGTGTAT GTGTGTATAT GTATGTGTTG TGTCTGTCTG TATGTATATG TGTATATGTA 900
TGTGTGCCTG TGTATGTGTG TGTGCATGTG CTTGTGTGTT TATGTATGTG TGTATATGTG 960
TGTGTGTGCA TGTGCTTGTG TGTTTATGTA TGTGTGTATA TGTGTGTGTT TGTGTATGTG 1020
TGTGCATGTG TGCTTGTATA TATGTATGTG TGCATATGTG TATATGTGTG TACCTGTGCT 1080
TGTGTGTATA TATGTGTGTA TATGCTTGTG TGTGTATGTG TGTACATGTG CTTGTGTATG 1140
TATGTATATG TACGTGTATG TGTGCATGCA TAGTCATGGG AAAGCATACA AAGCATTCCT 1200
TTTGAGCTGT GTACCAACTT CCAACCAATA TGAATGAACT TTTACCTTCC TCCAAGCTGG 1260
CTTAGGACCA CAGAGGGAAT TGGCTTTGTT CCTCTACTCT AGTGACGCCA CCCCTTGCCC 1320
CTGAGTATTT CCAGTCCCAT AGCCACTATC CACTAGAGCA GTGGGAGGGC TCAGCGAATG 1380
CATTTTCTTA TGGCCATTGC TCACCAACCT GTTTATGAAA GAGGTTTGAG GCGTGACAGC 1440
CAGTAAATCT CAGTGTTGCA TAAGGACAGA CACTTGTTCT CGCAGTATAT TTGAAGCCAC 1500
TGTTGGGGGT GCCACTCAGG ACTCTCCAGA GAAACAAAAC CAGGAGCAGA GACACACTTG 1560
TGAAGATGCA CGCATACACA GAAATACCCT CTCCTCTGTC TGTTGTGAGC TTAAGTCCTG 1620
ACAAATCCAT TGCAAGTTAA AAATAAATAC CAAGTTTAAA AAAAAAAAAA AGAAAAGCAT 1680
TCAATACATC CAGCCTAGCC CACCATGCTT GGTCACTTAA TAGTCTGCAG CATGGCAAAG 1740
GTATCCACCA TCAAGCTTAC CCTGCAACTG ACTGTCACAG GAACCATCCT GAAGTCGGCC 1800
TGTGAGAACA GAATGGGTAT GTAGATACTC ACCATTAAAA CTCGCCACTG GAAGCACACT 1860
GGGTCTGCAG ACTAAGAGAA ACATTACATT CAAAGGAGAG CTGAGTGACA GGCACACCGG 1920
AAGTACTGAG TCATCGGTTC CCGGCTGGAA CCTGCTCACC GTGCCAAGAC TGCATTGCCA 1980
GCCTAGGGCT GGAAGAAAAC CCAAACCTGA AGCGTGGTTT CTACTGAGTG ACTGACTGTC 2040
TTTGTACCAC AATGAAGTTG GGACTGCAAA AGCTGAACCA TCGCAAACCC AGGACAGTGT 2100
GTCTGTGCAG TGTGGAGGTC TGCGGTCAGC TGTGGGGTCA CGTGATTCTG AAGGCCCAGA 2160
AGGCTCCTCC ATGTGCCATC TGTCAGTTGG AACAGAAAGG CTCATGGCAC AGTTCAGAGG 2220
TATGAGCTGG AGAGCCAAAG GCATAAGTTC TACTTGGGTT GAAGTCTTGA GAAGCAGAGG 2280
CCCAGAAAAA GAGGAAAGAC CGATATCTTC TCACAGAAGC CTGCTGTGCG GAAATTCCCA 2340
GAGCCTCAGT CATACCCTGG CATGCTGCCG CTGCAGCTGC ATTTTCTGCT GGTTTCGCTT 2400
CCTCTTTCTC TTTAACCTCA CAATATAGCT GCTAGCCTGG TCTCTGTATG GGAGGGGTCT 2460
GCATTCTGTG AGCCTAATTC AACAGTACAT GCTGAGTACT TAGCCTTTGG CAGATGACAC 2520
GTAAGACACA TCAAAACAAT CATCCATCAT GATCAAGTAG GCTTCATCCC AGGGATGCAG 2580
GGATGGTTTA ACATAATCCA CTATATAAGC CAACTCAAAG ACAAAAACCA CATGATCATC 2640
TTGTTAGATG CTGAGAAAGC ATTTGACAAA ATCCAACAAC CATTCATGAT AAAAGTCTTG 2700
GAAAGATCAG GAATTCAAGG ACCATAACTA GACATAATAA AAGCCATGTA CAGAAAACCA 2760
GTAGGCAACA TCAAACTAAA TGGAGAGAAA CTTGAAGCAA TCCCACTAAA ATCAGGGACT 2820
AGACAAGGCT GCCAACTTTC TCCCTACCTA TTCAATATAG TACTTGAAGT CCTAGCCAGA 2880
GCAATTAATT AATTTTTAAT TAGCAATTAA AAAGAAGATC AAGAGAATAC AAATTGGAAA 2940
GAAAGAAATC AAAATATTTT GCAGATGATA TGATAGTATA TATAAGTGAC 2990