EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-26695

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chrX:7316590-7318330

Target genes

Number: 19
Name	Ensembl ID

Foxp3	ENSMUSG00000039521
Ppp1r3f	ENSMUSG00000039556
Ccdc22	ENSMUSG00000031143
Cacna1f	ENSMUSG00000031142
Syp	ENSMUSG00000031144
Prickle3	ENSMUSG00000031145
Plp2	ENSMUSG00000031146
Magix	ENSMUSG00000031147
Gpkow	ENSMUSG00000031148
Wdr45	ENSMUSG00000039382
Praf2	ENSMUSG00000031149
Ccdc120	ENSMUSG00000031150
Smt3h2	ENSMUSG00000082617
Tfe3	ENSMUSG00000000134
Gripap1	ENSMUSG00000031153
Kcnd1	ENSMUSG00000009731
Otud5	ENSMUSG00000031154
Hdac6	ENSMUSG00000031161
Was	ENSMUSG00000031165

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NKX2-5	MA0063.2	chrX:7317872-7317882	ACCACTTGAG	+	6.02
ZIC1	MA0696.1	chrX:7317051-7317065	CACTGCAGGGGGTC	-	6.46
ZIC3	MA0697.1	chrX:7317050-7317065	ACACTGCAGGGGGTC	-	6.4
ZIC4	MA0751.1	chrX:7317050-7317065	ACACTGCAGGGGGTC	-	6.61

Enhancer Sequence

CTGATCATGG AGCACGCGTT GGCGAGCTGC CAGCCCTTCT TGTGCTTTTC TGGAGTTTGC 60
TCCCTCCCTC CCACATCCTG CTCAGTCCCC AGCTGGGCAA GCAGGTGACA TCACCTCCCA 120
CCACCTGTCC TAGCCTCTAA GGCAGGTGAC TAGGAAGGCC TATCAGAGAC AGCAGAGTTC 180
TCGTTTTAAC ACCCCCCCCC CCCGACCCCT TGAAATCCAC AGCTTGTCAT GATGTGGTAG 240
AGCAGACCCA GAAAACCAAG AACGCCAAGG AGAAGCCCCT TCCCCATTTT CACACTATAG 300
GGTGTGCTCA GACTGTCTAC AAGGTACCCC CGCCCCCCAG TTTTCTCTAC AGTCTTCTGC 360
TTGTCCCACA GAGTCTGTAT CCCTCCCTCA AAGGACTCAT GGACTATCCT CCACTGCAAT 420
GGTTAGGCAA TCCCATAAGC CTTTTGTACA GAAAGTTTGT ACACTGCAGG GGGTCTCACA 480
AGCCCACCCA TCTGAGGTCC AGCACTTTCG GCATGGTAGG GTGTCTTTAG TGTCCCACCT 540
CAGCCTCCTC GGTCCCTCAG CCCCCGAAAC TTCTACTTTC CCAGGACCCA TTTTAATTCG 600
GAAAACTTTC ACAAGGCTTG CCTGAACCCT TCTCCACCCC AACAGAAAGC TAACTCCTCC 660
CACCTTGGGT CCATTTACCC GTTCACCAAC ATTGTCTCAT GTTTCACATC AGAGGGCCTC 720
CGTCCTTCCT TCTTTAGAAA ATTAGAGTAT CCCGGAGTCG ACACAGGGTC CAGTCAGGAA 780
CCCCGACTCC ACCCCATCAG TCTGACCTCA GGGACATAGT TATGGCATGA GTCATTGGGT 840
CACTAGGCAG GCTAGACATG GATCAACGCC CCACACCTCC ATACCTGACT CAGGAACCTT 900
TGCTTCTACT CTTCCATGTT CTGTACACTT GGAACTTCAG ACTGCCTGAC ATCAGACAGA 960
GATAGTAAGA AGGCAATCTA CCACATTCCA GCATCACTAC CATGCCCTCA TATGAACCTC 1020
TGAGACCCTC CTGCCCACAC CAGAGCTTTG CCTTGTCATT CTGTGGTCCT GTTACGGGCT 1080
TAGGTTGCAG CAAGCGAGCT ACAGAGGGCA CATGCGGGGA AACACACACA CACAGAGGCA 1140
GGCCCAGCAG GTTTTTCAGG TCTGCCCTTC TGACACCACG GCTGAGAAAA ATTCCTGGCT 1200
GTAATGACTG TTTACAACCA AGATACTTCA CCTGGGTGGC ACTCCAACAC TGTCAATGAG 1260
AGCCCCATTT CCACATCCTG CCACCACTTG AGCAAATGCA CACAGAGTCT GGACCTGATC 1320
CCCATTGCTC CCCCAAACAT ACAGCACACC CCCTTCAATT ACTCTGGCTG AACAAACAAA 1380
CAGAGGGACA AGCAGATACA GATGCCTGAA CAACAGTGGT ATCTAATCGG TTCAGCTCGT 1440
CTTCTCTGAG GCACTAGTCC TGATAAAAAG GGGGAGAGGG GCCGAGAAGA GAAGGCTGAG 1500
TCTCTGCCCC GTCCTTCCTC CTCCATTTTC CAACCAAGAA TTATTTTGAT ATCAAGAAAG 1560
GAAAATGGAC ACGTGAGGCT TTGCCCTGGT CCCCTGATCC TCCCATACTG AACACCACCC 1620
CTCCTATCGC TACCCTATAT TCTCAGGGTC CTCCTTCCTC AGATCTGGAT CTCTAGAAGG 1680
GAACTTCCTC AGTTCCTGTG CCATTACCCT ATCTCACGGC CCTGCCCCAT TGCTCGCTGG 1740