EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18309

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:134258210-134258850

Target genes

Number: 12
Name	Ensembl ID

Zfp593	ENSMUSG00000028840
Extl1	ENSMUSG00000028838
Pafah2	ENSMUSG00000037366
Stmn1	ENSMUSG00000028832
Paqr7	ENSMUSG00000037348
2610002D18Rik	ENSMUSG00000078521
Fam54b	ENSMUSG00000046671
Man1c1	ENSMUSG00000037306
Ldlrap1	ENSMUSG00000037295
Tmem50a	ENSMUSG00000028822
D4Wsu53e	ENSMUSG00000037266
Syf2	ENSMUSG00000028821

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr4:134258827-134258847	GGGAGGTGTGTGTTGGGGGG	-	6.31
RREB1	MA0073.1	chr4:134258623-134258643	ACGGGGGTGGTGGGGGGGGG	-	6.46
RREB1	MA0073.1	chr4:134258620-134258640	GGGACGGGGGTGGTGGGGGG	-	6.63
ZNF263	MA0528.1	chr4:134258625-134258646	GGGGGTGGTGGGGGGGGGGGG	+	6.08
ZNF740	MA0753.2	chr4:134258632-134258645	GTGGGGGGGGGGG	-	6.92

Enhancer Sequence

TCTGCGGCCC ACTCCTTACG GGGAACCAGT CCAAGACCCG CCTCATTAAG CCAATAACCT 60
CGGAGCTTCT GTAACATTCC CACTGCTTTA TTGATCACTC CTTCGTCTTT CACATGCAAT 120
TATGTACAAT TGTGGCAACG CTCGATAGAA GCAGTTAGCA GGAATGCTCG AGATCTCTGG 180
TCTGCAAGAG GCCGAGAGAT TACAAAACAG GACCCCAAAT ACCTCACATG TCTTGGGTTT 240
TCCAGAGCCT GCTGGAGCTT AGGAGAAGTC AAGACTTAAA AGGCACACAG GGAGGGAGAG 300
GGTTTCTAGT GGCTCCCTCC TGTACAAACG AAAACTAAGG ACCTAAAATC CACTCCTACT 360
AGCAACCCAT CAGGGAAAGC CTGGAGCCCA CCAGGGCTAG GAACTTAAAG GGGACGGGGG 420
TGGTGGGGGG GGGGGGAATC CACCTGGAGG TTGGTAGGAG CCATGAACTA ACCTAGTTAT 480
CCTAAAGTAG GCACCAAGCA AAGAGAGTAA CTTCGGATTG AGGGGCGGTG CTGCGGCCTG 540
CCTGAAGGGT CTTGGGCAGA CCAGGAGCCA GGAGAGGCCA AGAAGGTGGG GAATCGCTTG 600
CAGCTAGAAG TCTTGGCGGG AGGTGTGTGT TGGGGGGGGG 640