EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18290

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:133910920-133912280

Target genes

Number: 20
Name	Ensembl ID

Gm13060	ENSMUSG00000049410
Ubxn11	ENSMUSG00000012126
Sh3bgrl3	ENSMUSG00000028843
Ccdc21	ENSMUSG00000037443
Gm13131	ENSMUSG00000081772
Catsper4	ENSMUSG00000048003
Cnksr1	ENSMUSG00000028841
E130218I03Rik	ENSMUSG00000086322
Zfp593	ENSMUSG00000028840
Grrp1	ENSMUSG00000050105
Pdik1l	ENSMUSG00000050890
Trim63	ENSMUSG00000028834
Slc30a2	ENSMUSG00000028836
Extl1	ENSMUSG00000028838
Pafah2	ENSMUSG00000037366
Stmn1	ENSMUSG00000028832
Paqr7	ENSMUSG00000037348
2610002D18Rik	ENSMUSG00000078521
Fam54b	ENSMUSG00000046671
Man1c1	ENSMUSG00000037306

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXC1	MA0032.2	chr4:133911051-133911062	ATATTTACTTA	-	6.14
KLF13	MA0657.1	chr4:133912212-133912230	ATGCCACGCCCCTCGCTG	+	6.89
SP3	MA0746.2	chr4:133912213-133912226	TGCCACGCCCCTC	+	6.08

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_07767	chr4:133909025-133914488	Intestine
mSE_11856	chr4:133911461-133914068	Placenta

Enhancer Sequence

CCTGCAATTG CCATCCTCCT GCTTCAGCCT CCTGAGTAGC TGAATCCCAG CATGCACCAT 60
GCACCACCCC GGCCTCCTCA CCTTTGAACT TCTCTCCAAC TGTAAAGAAA AGCTATGTCT 120
CTGGCACTGT CATATTTACT TAGGGTCAGG TCTGTGTGAA ACCTGCGTGG ACCTGGAATG 180
GGGAAGATGT ACCCCTCCAG TCTCAAGGCA TCACATGCCC ACCCCTCAGC CTCCACCAGC 240
CCCAGGATTC TGGATACTGG GTACCACAGT GTGCCACATC CTTAAACCTC TCAAGAGAAG 300
GTTGCCTGGG ACTTTGAGAG GGTCTCTTGC CCCTGCCTCC TGAGTGTTGG AACTATAAAC 360
ACCAGACCCT CTTCTTCCTT TCTTTTAAAT TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 420
CGTGCACACA CACATACTTA TCTGTATGTG AACCACATGT GTGGGTGCCT GTGGAGGCCA 480
GAAGGCGGGT GTTGGATCCC TGGGAACAGG AGTTAATATG TGTTTGTGTG CCATCCAATG 540
TGTGAGTGAG GAACCCAGGA AGAGATCCTT TGCAAGAGCA GTCAGTGCTC TTAACCTCTG 600
AGCCATCTCT CTAGCCCCGC ACCACCCTAC TTTCATTTTT ATAGACAAGA AAAAGGAAGG 660
TTCAGAGAGG CCCACTGCTG GCGACAGATG TCCCTCATTC CTGGGCTGAT GACAGCAGAA 720
GTTGGACCTG CCTTGAGCTG CATGTTTAGC CCAGCGTGAG CCCTGAAATG CAACAGTGCT 780
TTCCACACAG TCTCAACCAA CCCCAAGGCA GTCCATCGTC CTGGATGTCC AAGCCACCAC 840
TGCAAAGGTG CCTTCTGTCC CTGGGCTGGC CCTGGCACCG GGTGCCCTTT CCATCTTTGG 900
CAGGCTGCCT AGACTGCAGC TGTGTGAGTC CTCTTACCCT CAACTGCTCC TGACCCTGGG 960
CCAGGCCTCC TCCCCCACTT TAATCTCAAA TCCGCTCCTC CCCCACCCAC CTTGCACCTC 1020
AAGGCATCTG ACAGCACCCT GCTTCCATTA GAAGACCCAG ACCGGCTTTC CACACCCAGC 1080
TGTGACAGGC TCCAGGAAGG ACCTGAGTCA TACAGGGGCA AGGAGTGAAG TTGGAGAAAG 1140
AGGTTGGGAG GCCTCAGGGG ACAGCCTGTT CCAGCCAGCA ACCTAGTCAC GGGAGTTTCC 1200
ACAGTGGCCG AAGCCATCAA AGAAGGAAAA CACCCGATAC CTTGGGCTGG GTTAGACCCC 1260
CCACCCTCAC TGTCTGAAGT CACCCCAGTT CCATGCCACG CCCCTCGCTG ACCCTGAGCG 1320
CCCTGCCACA CAGGGCAGCT GCTGTAAGCG TATTTATAGC 1360