EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18280

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:133484000-133485550

Target genes

Number: 14
Name	Ensembl ID

Gpatch3	ENSMUSG00000028850
Sfn	ENSMUSG00000047281
Zdhhc18	ENSMUSG00000037553
Pigv	ENSMUSG00000043257
Arid1a	ENSMUSG00000007880
Gm12985	ENSMUSG00000080946
Rps6ka1	ENSMUSG00000003644
Hmgn2	ENSMUSG00000003038
Dhdds	ENSMUSG00000012117
Gm13060	ENSMUSG00000049410
Cd52	ENSMUSG00000000682
Ubxn11	ENSMUSG00000012126
Sh3bgrl3	ENSMUSG00000028843
Zfp593	ENSMUSG00000028840

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ATF7	MA0834.1	chr4:133484701-133484715	ACATGACGTCATAA	+	6.05
JDP2(var.2)	MA0656.1	chr4:133484702-133484714	CATGACGTCATA	+	6.04
KLF4	MA0039.3	chr4:133485166-133485177	CCACACCCTCT	+	6.02

Enhancer Sequence

CAGTAAAGAA AGTCGGAGGC CAATTGCTGG GTGGAAGTTA TAGGCGGGAC TTCTGGGTGC 60
CAGGAGGAAA AGGAGAGAGG TTTTCTGCCA TGTTTTTGAG GGGAAGAACA CAGAAACCAT 120
GTGGTCTCCG AGGCAAGGGC TGGGGGAGGG GGAGCTGGGG CCTGTGGCCA CTACTACTAC 180
AGGGGGTGGC CATTGATGTT TGACAGGGGC CAAGTGGGAC CAGCCACTGT AGTTTAGGGC 240
TGATAATAAA TTAGTAAGGG CAAGCTTTTC CAGGTTGGAG ATAGGAACAC TATTTGTTTA 300
TTTATTTGTA AAGATTTATC ATTATATCTA AGTACACTGT AGCTGTCTTC AGACACACCA 360
GAAGAGGGCG TCAGACATCA TTACACATGG TTGTGAGCCA CCATGTGGTT ACAGAAATTT 420
GAACTCAGGA CCTCTGGAAG AGTAGTCCCT GCTCTTAACC GCTGAGCCAT CTCTCCAGTC 480
CCATGGAACT CACTCTTTAG AGCAGGCTGG CCTCAAACTC AGAGAGATCT GCTGGCTTCC 540
TCCTGAATGC TGGAATCAAA GGTGTGCGCC ACCATTGCCT GGTGAAAAGA GAAACTCGAT 600
ATGGTTTCCT CACTTTCAGC AGCACTGGGA ACCAAAGTGT GACAAGCTGT GTGCCAGGCA 660
AGAACCCCTC CCACTGAGCT GCAGTCCCAG AAGGAAGGGA CACATGACGT CATAATGGGA 720
TAAGCCTGTC TGTGATGGGC AATGACAGGA AACGGTGGAG GCCATCATAA AGATGCTATG 780
GCTTTGGTGG TTTTTGTTCT TTGAATTCCA GGGTCCCACG CCGTCTGTAT TAGTTGCTTT 840
TCTGTTGCTG TATAAAACCG CTGTGACCAA AAGCAAACTT TAGGAAGTGT TCAGTCGGCC 900
TTACAATTAC AGAGAGAGAG AGAGTCCTGT GGAGTGTAGC AAATGGCAGT TAGAGCAGGA 960
AGGTCAGAGA TCACTTTACT CCTCACGTGG GAAGCAGAGG GGGCTAAGAG GAAGTGGGGT 1020
TACAACCTCT CAAAGGCCCG GATGAAGTTC TTCCCCCTGC AAAGACCACT CCTCCCAAAG 1080
GTCCCACAAC CGCCTGGGGC AGCACCACTC ACCGGAGACC CCGGTTCAGT TACCCGAGCC 1140
CACGGTGATG CTTCTCCTGT AGACAACCAC ACCCTCTATT TGTTTTATGC TTTAATAGAT 1200
TTTCCCGGTT AGTTTACAGG AAAAGCATAG AAGACAGACA CCCTGTACTT GTATGTAGAA 1260
CAATTCAGGA AATCCCAAAG ATTAAAGCTG TGCTGGCCAG TTTTATGCCA ACTTGACAGA 1320
AGCTGGAGTC ATCTGAAATG AGAGAGTCAG GAAAATGCCT TCATAGATCG GGCTGCGGGC 1380
AAGCCCGTGG AGTTTCCTTA GTTAGTGATT GATGGGGAAG GGCCCAGCCC GTTGTGGGTG 1440
GTGCCATCCT TGGCCTGAGT CCTGAAGTCT CTAAAGAAGC AGGCTGAGCA AGCCACTGAC 1500
AGCAAGCCAG TAAGCAGCGT CCCTCTATGG CCTCTGCTCC AGCTCCTGCA 1550