EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18203

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:132044560-132045740

Target genes

Number: 15
Name	Ensembl ID

Ythdf2	ENSMUSG00000040025
Rps15a	ENSMUSG00000083757
Gm13252	ENSMUSG00000084105
Gmeb1	ENSMUSG00000028901
Taf12	ENSMUSG00000028899
Rab42	ENSMUSG00000089687
Trnau1ap	ENSMUSG00000028898
Rcc1	ENSMUSG00000028896
Phactr4	ENSMUSG00000066043
Med18	ENSMUSG00000066042
Sesn2	ENSMUSG00000028893
Atpif1	ENSMUSG00000054428
Dnajc8	ENSMUSG00000054405
Ptafr	ENSMUSG00000056529
Rpa2	ENSMUSG00000028884

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr4:132045466-132045479	AAGGTGTGAATTT	+	6.19
EWSR1-FLI1	MA0149.1	chr4:132045022-132045040	GGAGGGGAGGGAGGAAAG	+	6.42
EWSR1-FLI1	MA0149.1	chr4:132045027-132045045	GGAGGGAGGAAAGGAAGG	+	6.94
TBX21	MA0690.1	chr4:132045466-132045476	AAGGTGTGAA	+	6.02
TBX2	MA0688.1	chr4:132045466-132045477	AAGGTGTGAAT	+	6.02
ZNF263	MA0528.1	chr4:132045028-132045049	GAGGGAGGAAAGGAAGGGGCG	+	6.17
ZNF263	MA0528.1	chr4:132045019-132045040	TGGGGAGGGGAGGGAGGAAAG	+	6.77
ZNF263	MA0528.1	chr4:132045024-132045045	AGGGGAGGGAGGAAAGGAAGG	+	7.08

Enhancer Sequence

AGACTCAACT CTCTGCCAGC ACCAAATATG CAGAGACAAT CTTTACACAG TGCACAATAA 60
TATTATCCCG ACGCAGCAAT CAAGGGCAGA CACAGTCTCT CTTACGTAAG GGGTTGGAGA 120
CTAGCCTGAG GTTACAAGAT CCCCTTTCAA AACAAGAACA AGGAAACAGG GTCTTTCTCA 180
GTAGCCTAGG CTAGCTTTTA ATTTGCTCTG TAGCTAAGGC TAGCCTCAGA CTCAAGATCC 240
ACTTGCCTCA GCTTCCTGCA ACCTTGGATT ATAGGTGTGT ACCACCATCC CCAGCAGACC 300
CCAAAATATT CTTCTGCCAT CAAGCACTTG TTGGAAGCTA ACTTCGATCA CCTAGAGGGG 360
ACAAAACCAT CAGCCAAGGT ATTCCCTCTG CTCCAGTGCA GTTCTAAAAG GACTTAGCTA 420
AAACATTCAG AAACTGACAC TCTTGGGGAG GAAGGAAAGT GGGGAGGGGA GGGAGGAAAG 480
GAAGGGGCGG TCAGCAGAGT CTGTGGAAAA CTAGAGGAAT GTAGAGAAGT TCTCCAACTG 540
TTCTCAGCTT CCAAGAAGGT ACTTTAGTGG GTGGGGAGTG CTCTTAAATG TGCTGCCGCT 600
GCTGTAATAG TCTGGAAGAG AAGTTTCTGC TCCGACATTG GAAATCGCTT TGGAGGACCC 660
CGAATTTCTT CTTTGTGATG CCAATCACAA CTGCAATGTT CAGTCCTGAG TTGAGTAACA 720
ATCCTACATC AGCCTCCTCC ACTTGCAGGC AAATCCCAAG AGTGGCAACT TTGTCCCAGA 780
ATTTAGTACT CTATCTCCAG GGCTTGGTAC TCATTGGCTC GGCAGCCTCT GGTGAGTGAG 840
CGAACAGGTG TTAAAGATGT CACCTCTCCA GCTCTGCCTC CAACCACTGG TCCTCCAGGG 900
GATTCAAAGG TGTGAATTTG TCCAGCATGA CTTAATCTCC TATCTGCCTG CCCTAGGGCT 960
CTGAGGACTC TCTGAAAGCA AGCTGCAGGA GATTCCTTCT GCTCCTTCTT CTACTCCAGA 1020
TAAAATGTTG CAGTGTGCAA ACAATTACAA CTACAAAACA ATTACAAAAA TTGTAAAGTC 1080
AAACAAATAG ATAACTATTA GTACCTAGTA TCGGGCTATG CTGCTTGTGG ATCAAGAGCC 1140
GTTGATTACA ATACTGCGGA CCAGAACAGC CAAGAGTTCC 1180