EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18170

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:129944460-129944980

Target genes

Number: 9
Name	Ensembl ID

Col16a1	ENSMUSG00000040690
Pef1	ENSMUSG00000028779
Tinagl1	ENSMUSG00000028776
Serinc2	ENSMUSG00000023232
Fabp3	ENSMUSG00000028773
Gm10570	ENSMUSG00000073752
Zcchc17	ENSMUSG00000028772
Snrnp40	ENSMUSG00000074088
Nkain1	ENSMUSG00000078532

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ELK3	MA0759.1	chr4:129944911-129944921	ACCGGAAGTA	+	6.02
ETV1	MA0761.1	chr4:129944911-129944921	ACCGGAAGTA	+	6.02
ETV4	MA0764.1	chr4:129944911-129944921	ACCGGAAGTA	+	6.02

Enhancer Sequence

GATGAGAGTG CTGTTTAATC TCTAACCTCC ACAGTCAAGC AAACAACCCC TGCACTACTG 60
GAGCAAACCC CTCCCACCTT GGGTGCCTGG TTCCATTAGG CCCCACCTCT GGCCTGGTAC 120
ACTTTCTCTT TGTGACTTGG AACAGATATG CTACCAGGTT ACAGTGAGAT TCAGTTTCCG 180
CTCACTCTGG TCCGTAGAGC TCAAACCCCA GATCCTTCTC CAGGGGCTCC TGTACCCGAA 240
ACCTCAGCGT GTCTGGGGAC TTATGCACAC CCAGAGGGCC CAGGTTAAGA GAGACACGGG 300
CCCACCAAGT ACTTCCCAGC ACAGAGGTCC ACCCCATTTG ATCTGCACTC CCCACCCTGG 360
CTCTGTCTCG ACCAGTTCCC ACTCGAACTG CTTCCTACAG ACACACTGGC CTCTGAACAG 420
GAGGGAGAGA CACACACGAG CTCACAGGAA CACCGGAAGT ACACTATGGA GCTGTACCTG 480
GCACGAAATA GCAGCAGGAG ACTGACCACC AGGTGCCTGC 520