EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18090

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:126304260-126304890

Target genes

Number: 13
Name	Ensembl ID

Eif2c3	ENSMUSG00000028842
Eif2c1	ENSMUSG00000041530
Gm12935	ENSMUSG00000083461
Gm12934	ENSMUSG00000082888
Clspn	ENSMUSG00000042489
Gm12936	ENSMUSG00000081319
5730409E04Rik	ENSMUSG00000073755
Gm12933	ENSMUSG00000081210
Psmb2	ENSMUSG00000028837
Ncdn	ENSMUSG00000028833
AU040320	ENSMUSG00000028830
Gm12937	ENSMUSG00000082498
Zmym4	ENSMUSG00000042446

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr4:126304303-126304314	GCCCCGCCCCC	+	6.02
KLF4	MA0039.3	chr4:126304527-126304538	CCACACCCTGC	+	6.62
KLF5	MA0599.1	chr4:126304303-126304313	GCCCCGCCCC	+	6.02
SP1	MA0079.4	chr4:126304300-126304315	AAAGCCCCGCCCCCA	+	6.51
SP2	MA0516.2	chr4:126304299-126304316	AAAAGCCCCGCCCCCAC	+	6.72
SP4	MA0685.1	chr4:126304300-126304317	AAAGCCCCGCCCCCACT	+	6.82

Enhancer Sequence

GATCCGGCCT CTGCTCGCCA GGCGGTGGCT TAAGTTTTTA AAAGCCCCGC CCCCACTGAG 60
ACCTCCCGGA TTTCTTTACG CCTCTTGAGC AGGGAGTCTC TGTTTTTGGA CACTGTCCCT 120
TCCTGTTGTC CCACTCTCCA CCCTTTTTCC TGTTCTCCGC ACGCCTCATT TTGGCCTTCG 180
TCTACCTAAG CTCCTTTAAG GAGGCTGGTT CTCAGGACTG AGGAGGAAAT GAGACGAGGG 240
TCTGTGGCAG ACAAGGAGGA AAGGACCCCA CACCCTGCCC CCTGCAGGCC TCACCTAATC 300
GCCACACTCT GCATTATTAC CCGCCTAACG CGGCGTGCTT TTAAATAAAA TATGCAAAGA 360
TTTTCCTCTC AAATTATCTC CCCAGGCGAA TGAGCTCAAC TCCAGCTTGT TAATGGAAAA 420
AATGCAAATA GGGTCTCCCA CTCCTCTCCC CCAGCCCCTG GGCTCCGGAC AGCTAAGTCG 480
CTTTGCTGGC CTTCTATTTG GGATGGCTGT TTCCTTTGAA ACCTTGGTGG GGGCGAGCTC 540
CATCCGAAGA GTGTCTTAGA AAGGAAGGAA CGTCCCAGGC AGGACAAGCT CGTGAGACTG 600
CCCTCTCTCA AGCTCGGTCC CTTCTGAGAT 630