EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-18085

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:126145000-126145640

Target genes

Number: 13
Name	Ensembl ID

Fam176b	ENSMUSG00000050212
Trappc3	ENSMUSG00000028847
Col8a2	ENSMUSG00000056174
Tekt2	ENSMUSG00000028845
Eif2c3	ENSMUSG00000028842
Eif2c1	ENSMUSG00000041530
Gm12935	ENSMUSG00000083461
Gm12934	ENSMUSG00000082888
Eif2c4	ENSMUSG00000042500
Clspn	ENSMUSG00000042489
Gm12936	ENSMUSG00000081319
5730409E04Rik	ENSMUSG00000073755
AU040320	ENSMUSG00000028830

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr4:126145037-126145048	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr4:126145034-126145049	ACAGCCACGCCCCCA	+	6.04
SP3	MA0746.2	chr4:126145036-126145049	AGCCACGCCCCCA	+	6.34
SP4	MA0685.1	chr4:126145034-126145051	ACAGCCACGCCCCCACC	+	6.18
SP8	MA0747.1	chr4:126145037-126145049	GCCACGCCCCCA	+	6.11

Enhancer Sequence

CTCCTAAACC CAGGGGCACA GGAGGGATAC TCCAACAGCC ACGCCCCCAC CACATAGGGC 60
AGCCCTTCAG GCTGGTACCT CCGCGCATGC TCCCGCGCCA CCACTCAAGT CCCCAATCTA 120
AGGGGGGAAA TCCCTGGTCT AAATCCCCAC CCACCGCCCC CTGACCCTCA CCCCCGCTTC 180
AGGCCCAGCT GGGCGGAGCT CAGAGGCCAG CCCCGGCGCC TACTCCCCAG AGACATTAGC 240
TTAGCCCAGC CCAGCACGGC CGAGCCCCCG CCCCCCGACA GGCGGTAGTT CCAGGCCCAT 300
CTGTGTCGCC CCCCTCCTCT CCAGGACACC TGGAGCCCGC CCCCCTGCCA CCTGCCGGGC 360
CTCCCCATAG GCCTCCCCAG ACCTCACGGA AGGACACCGT GCATTCAGGC CCTTCTCCCA 420
GGTTACTTCT CACCCTCGGG ACAGTATACT GCTTCCTAGG ACAAACAGCC CGGGTCTCAG 480
ATCTTCACAT GGTTCTCAGC CGGAACTGCA TACAACCCCC TTCAAAATGG GCCCCCCATC 540
CCCTGAGAGC CCCTCTCCTC ACTCTGCAAC CATGCTCTAT GCCGCGAGAG CCTATAGGGC 600
TTTGGAATAC ACACTGCTCC CAGTCCCCGA GGGCCCTTAC 640