EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-17566

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr4:63051840-63052930

Target genes

Number: 9
Name	Ensembl ID

Col27a1	ENSMUSG00000045672
Orm1	ENSMUSG00000039196
Orm3	ENSMUSG00000028359
Orm2	ENSMUSG00000061540
Akna	ENSMUSG00000039158
Whrn	ENSMUSG00000039137
Atp6v1g1	ENSMUSG00000039105
Gm11483	ENSMUSG00000083943
Tnfsf15	ENSMUSG00000050395

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr4:63052473-63052484	CAGCAGCTGTC	-	6.14
NFYB	MA0502.1	chr4:63052548-63052563	CTGATTGGCTCACTT	-	6.96
Tcf12	MA0521.1	chr4:63052473-63052484	CAGCAGCTGTC	-	6.02

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_00316	chr4:63046730-63078740	pro-B_Cells
mSE_03329	chr4:63050035-63053536	Bone_Marrow
mSE_11928	chr4:63048969-63053268	Spleen
mSE_12934	chr4:63049145-63053293	Thymus

Enhancer Sequence

AACATGGAAC TCAGAAATTG AAGCATCTGT GGGCCCTGAT CCCCTGTTCT CCCCTGCAAG 60
TTGGGACCCT GAGCTGTGCC CCAGTTACTC CCAAAATGGC AATGAGGCTG GGGTGGAGGG 120
AATTATGGGC CATTTTCAGT GCAATCACTC GAACAGAACT CACTCTTTTC TTGGGCCAAA 180
GAGTTATCAT TTCAGAGAGC AGCAGAGGGA GGCTGAACCA TCCAGCATCT CCTACAGTTT 240
ATCCTGGGAG CCCTCTCTGC AGCTCTCCCC AGGCCTGTCC TCAGACTCCC TCTCAATGCT 300
CGGAGCTCTG GGTCACCTAA AGACATCAGT GGGAGTTATT GTCTTCCAAA AGGTCTGCTC 360
ACAGCCCCAC AGATGTAACC CAATAGATGT GTCTAGAAGA CCATGTGGGA AGGGTCCTGC 420
CTGCACCTGG CAGGGCCACA GGCATGGAGA CAGGCAGGCC CTTTTCAACT TCTTGCTAGG 480
ATAGACTACA CCCGTGTTCC CCAAAAGTGG CTGAAGGCAT GAGGTCAGCA CATGACCGGG 540
GGACCTCGGA GTGGGAAGCA CTCTGCAGAA AGGTGGGGTG TCCTCTTTCT AGGGGGACAA 600
CCAGAGCTGG GGGAAGGGAG GTACATCTTT ATTCAGCAGC TGTCCTGCCT CCTCTCTGCA 660
GCCTGTTTGA GCAAACAAGG GTCTGAGGAA AGCAGGAAGT GCCAGGGGCT GATTGGCTCA 720
CTTCCTGCCT CGCCCCATTC AGGGTTCTCA GCCTCCTCTG GAGACAGGTC TTGGTGGAGG 780
GCTATGCTAC CCAGTTCTGA GTGGATGAGC TGATCCCTTC GGTGCCACAC GGGGCTGTCC 840
TACACGGGGT GCTCAGTTCC AGTTGGATAA GAGGAGGAGG TTTTGAGGGA GACACTGGAG 900
AAAGGTGAAA GTAAGACACT GGAAAAAGGG GACACCAAAG AAAGATTGAG CAGAAAGTCT 960
GCGCTACAGC CTGAAAGTCA CCCAGCTGGC TAGAATGAGA TCAGGAGTCA ACCTCGGTAG 1020
TCATACCCCC AGCCCCCAGG CACAGAAAAG GAGACAACAT CTGGTGACAT TCTTTAGTAC 1080
CCCAGGCTCC 1090