EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-15636

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr2:167523280-167524100

Target genes

Number: 10
Name	Ensembl ID

Slc9a8	ENSMUSG00000039463
Rnf114	ENSMUSG00000006418
Spata2	ENSMUSG00000047030
Gm11474	ENSMUSG00000082687
Snai1	ENSMUSG00000042821
Ube2v1	ENSMUSG00000078923
Gm20431	ENSMUSG00000089739
Cebpb	ENSMUSG00000056501
Tmem189	ENSMUSG00000090213
Ptpn1	ENSMUSG00000027540

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr2:167523611-167523632	CTTCACTTTCGGTTTTGGTTT	+	7.1
IRF9	MA0653.1	chr2:167523615-167523630	ACTTTCGGTTTTGGT	-	6.17
ZNF263	MA0528.1	chr2:167523909-167523930	TCCCCCACCCTCACCTCCACC	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03393	chr2:167523345-167524069	Bone_Marrow
mSE_08634	chr2:167523041-167524440	Liver

Enhancer Sequence

GAAGCCCTGT CTCAAAAAGC CAAAAAATAA AATATAAATA AATAAATAAC ATTTTTGTTT 60
GTTTCTAAGA CAGTCTCACT ATGTAGCTCT GGCTGGCCTG GAACTCACTA TGCACATCAG 120
GCTGGCCTTG GTGGCTTCAT GGCCTTCACT GTCTTTAGCA GGTCGGGGAC TCCAGGGGGC 180
TGTTTGTGGC TTGGTCCCCG CAGCAGCTGC ACAATCTCCT TGAATGTGAC TCAGGCTCTG 240
AGCCTCTGCA GGACCCAGAG GGCTGAGTGC TACTCTGTCC CAGTGCTGAC AGTGACACTC 300
TTGGTCACCT GACCAAAGCA AGTACTGCAG GCTTCACTTT CGGTTTTGGT TTAGGGTTTT 360
TGAGACCAGA CTGCCCTGGC AGGCCTCAAA CTTGCAGTCA ATTTCCAGTT TCTGTCTCTG 420
GAGCCCTGGG CTCAGCAGCG GCCATCATAC TGGGTCAGGG GGTCAGGTTT GTAAGGCCAC 480
TTCTCCCTCT TCCAACCCCG CAGACATTGG AGGGAAGGAA CTTTGAAACA ATGTAGATAA 540
GCTTGGATGG CCTCCAACTT TCAAGTAGTT ACTTATTTGC TTCTAAAATA ACCTTTTGTG 600
ACTTTTTTTT TTCTTTTTTT CTTTCTTTCT CCCCCACCCT CACCTCCACC TCCAAGACAG 660
GGTTTCTCTG TGTAGCCCTG GCTGTCCTGG AACTCACTCT GTAGACCAGG CTGACCTCAA 720
ACTCAGAAAT CTGCCTGCTT CTGCCTCCCA AGTGCTGGGA TTAAAGATGT GTGCCACAAC 780
TGCCCCACCT TTTGTGACTA TTTATTGACT TATTTATTTA 820