EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-13522

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr19:47375320-47378100

Target genes

Number: 6
Name	Ensembl ID

Taf5	ENSMUSG00000025049
Pdcd11	ENSMUSG00000025047
Gm6970	ENSMUSG00000091230
Sh3pxd2a	ENSMUSG00000053617
Slk	ENSMUSG00000025060
Sfr1	ENSMUSG00000025066

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)	MA0503.1	chr19:47377725-47377736	AGCCACTCAAG	+	6.62
RARA	MA0729.1	chr19:47377013-47377031	GAGGTCAGTGGGTCAAGC	+	6.38
RFX2	MA0600.2	chr19:47376115-47376131	GGTCTCCATGGCAACT	+	6.11
RFX2	MA0600.2	chr19:47376115-47376131	GGTCTCCATGGCAACT	-	6.23
RFX3	MA0798.1	chr19:47376115-47376131	GGTCTCCATGGCAACT	-	6.47
RFX3	MA0798.1	chr19:47376115-47376131	GGTCTCCATGGCAACT	+	6
RFX4	MA0799.1	chr19:47376115-47376131	GGTCTCCATGGCAACT	-	6.05
RFX4	MA0799.1	chr19:47376115-47376131	GGTCTCCATGGCAACT	+	6.21
ZNF263	MA0528.1	chr19:47376273-47376294	CCATCCTCTCCCTCTTCCTTT	-	6.2

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05639

chr19:47375212-47377243

E14.5_Limb

Enhancer Sequence

CAGATGATGA GCTAAACTCC CTTGCTCTTT TCAAAGACGG CTAGTTACAA TCCCACTTTG 60
GCAACAAGGT CCACACAGCC TGGGTACCAT GGCTGCCATT CTAATGCCTA GGAGTGGGTC 120
AGTCTATCTG AGGCGTGCCT GTGAAGCACC AGTTGAGGTG AGGGGAAAGG ATGAGAAGTC 180
GCTCCCACCC CTGGGTCTAG GCTAGACCCC AACATCCCAG TGTTGTATTC TTCTTTGAGA 240
CAGCCATCTG ACCTCCCTCA TCACATACTG TGAAAGTATA AGGCACGTGT GCAGAAAATG 300
CCTGGATACT TGGATGGTGA GTGTGTCGGT GGAGAGGACA TCCCAGGAAG ATAGGAAGAC 360
TCTGGGAAAG TGGGATTCCC CAGTTCACCT CAAAGAGGAA TGGGGAAGGC AAATTGCTCG 420
GGGCAGTTCC CAAGCGCAGC ACCAATGGAG CTCGGTGGAG CTCTCCAAAG CTGGGCCTGT 480
GAGAAGACTC CCTGGCTTGG ATTCTGGCCT CTTTAAGGCC CAGCGCTATG GCTTCCACAG 540
ATCTTGTTTA AACTTGAGAG GGTGGGGGAG GGGCCAAGGG AAACTACATT CTTCCCCACC 600
GAAGCCAAGA GTCTAAAGTA ACACTTCTGG TTGTGAGTGA TGGCAGTCTG TTTGTGATTA 660
TGGCCCTGGC TTTCTGGCAG GGCAGCCCTG GAACCCCACA GTCTTGCTGA CGGGAGGGAC 720
ACTCTCCCTC ACTTGGGTAA TCTTGTCCTC ATCTGACATG ACCAAAGACA TTCATCAGCC 780
CCTCTGCTTC CAACAGGTCT CCATGGCAAC TCCTCAAAAA CACTATTTAA AGAGGGGGGG 840
AAAGCCACCC CAAAACCCTA TCGTGAAATT CTTTCTGTTC CAGGCACGTC CTAAAGAACC 900
CAAGAAGCAT CAGCATGGGC TGATGTCATC TGCAGGAGGG AGGGGACGCC GGACCATCCT 960
CTCCCTCTTC CTTTCATCAG GGAGAACAAT GCATGCACAC ATGGATGCCC CTTTGCTGCC 1020
ACAGTCTGAG GCGGCTCGGG GAAGCTCAGC TGTGCTCTCT CCCGGAAATT TAATCTGCGA 1080
AGCATTTGGC CTCGAAAACT CAATTCCAAA GGTGTCCGGG AGCCCACCAA CCCTGTGATC 1140
ATTGTTACAA ATCCAGGGCT GCAAGAGTCC GACCCGTTTG GCAGCTGGGG AGAGCTGGCT 1200
GGGGGATGGG CAACATGGCC ACTGTCCCCT CCCCTGTGCC TCCTGTGTGG AGAGAGACTG 1260
TATGTTTATA CAGGCCCAGC GGCGGTGGGG AGGTAGCATA ACTCTCTAAG ATCTCCACAC 1320
CGTGGGACAG AGAGGCTACT TCTGGCTCGG TTGATAAAAG TGCAGTGGTT AGGGAATAGG 1380
AGAGCGTCAG ATCCAAGAAG CAACTGTGGG CACGGCTGTC ACCCCTCTGC CAAGGGCAGA 1440
CAAGGGCAGC TGGCGTGCGA AGGGACAAAG TAGCTTGAGG TAACCCATTA ACTGGTAGCT 1500
GAGCTTAGAG CGCAGATTGA CCAAGAACAC CTTATGCAAA GCCTGGCTTC CTTCCAGAAC 1560
GGCTCTACCA CTCTGCCACT CTGCCCATTA ATATGACACC CCGAGTGGTG TGCCAAGTGG 1620
CAATCCCTTG ACCCAGTGCC TCGGGCAACA AGTGGGAGTC TGGAGCTGGC AGCGAGCACC 1680
ACTGGGCTAG AGAGAGGTCA GTGGGTCAAG CCGGCCATGG TAGGAGCCCG TGCTTATGCT 1740
GTAGGTGCCG GCTGGTACAG GGACCTAAGG CCCTGCCATC TTGCCACACT TGGCTGCTAT 1800
CTGTCTCCTC CCAACAAACC GGCTCAAACC AGCCGACAAC TCAAATACGT GAGCACGAAG 1860
AAGACTTCAA GCCACGGGCA GGCTGGGGCC CTGGGAGAAC AGGAAACAAA TGAGAAAGAC 1920
AGAGTGACCT GGGAGCGCCA GGCCTGGGTG CCTAGCCAAC CGCAACAGAG CCCTTCTTGA 1980
GATGAGGCTG CAGGGGCCGA GCCTGGGGTC TGACGGGGAC TCAGCCAGCC ATGGGCAGTA 2040
CTGCATCCTC TGGAGGACAC CAGCTTGTCC CCAGCTTTAC TCTAGAGCCT AGGAAGACAA 2100
GCAAGCCTGC ATTCTCTGGC TGTGTTTGCC AGACATGTTA GGAGAATGAG TCTCTAAATA 2160
CAGGGCTGGG GAAGTGAGTC TAAAATCTAG CCTCAGCCAC AGCCTAAAGG GCCCGGTTGG 2220
GAGCAGTGGT TTTGTAGGTA GAGTGGCTGG AGAGTCCTGC TCCCATTCAC TGATACCTGT 2280
TACATTATTT CTACGACCTT AGAAGCTGAC TCCCCAGCCC ACCGCCTTCC CTCTGCACGG 2340
CAGGGAATAA CTGCTTTTGA TACCACACAG TAGGTCCTTT CAGTCTACTT ACTGCAGCTG 2400
AACTCAGCCA CTCAAGGGTA ACCTCCTCCC TTTAGCCAGA TCTCATCAGT CCCTTCCACC 2460
TATTCACCCT GTGGGCAACG CCTGACTTCT CCACCCTGGC AAGTTGCCCG CCACTCCTTT 2520
GTTTAAGATT CGCCTTCTTC AGGAACCTTC TCTCCACCCA GCCCAGCACT GAGCCTCCAC 2580
AAAACCCATA GCGCCCGGTC CATGTGCCAT TTTGAACCCT AGCCTCCTGT GGTCAACCTC 2640
ACCTTGCTTT CGGCTTTACG TGGTGAATGT CCTCAGCTCA CGGTATCTGT ATTACACGTT 2700
GAGTCTCAGG GATGTCGTTG TCGGCAAGGG CAAGACAATG GTGGATTCCT GTCCATTGCT 2760
CTGCCCAGTT CTATGCATGT 2780