EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-12884

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr19:3879790-3881370

Target genes

Number: 20
Name	Ensembl ID

Ppp6r3	ENSMUSG00000024908
Lrp5	ENSMUSG00000024913
1810055G02Rik	ENSMUSG00000035372
Chka	ENSMUSG00000024843
Tcirg1	ENSMUSG00000001750
Ndufs8	ENSMUSG00000059734
Aldh3b1	ENSMUSG00000024885
Unc93b1	ENSMUSG00000036908
1700055N04Rik	ENSMUSG00000037263
Aldh3b2	ENSMUSG00000075296
Acy3	ENSMUSG00000024866
Doc2g	ENSMUSG00000024871
Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
Gstp2	ENSMUSG00000038155
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Cabp4	ENSMUSG00000024842
Gpr152	ENSMUSG00000044724
Coro1b	ENSMUSG00000024835

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr19:3880545-3880566	AGTCAGTTTCTCTTTTGCTCT	+	6.19
Klf12	MA0742.1	chr19:3880988-3881003	GGCCACGCCCTGTTT	+	6.63

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02116

chr19:3880219-3882781

Macrophage

Enhancer Sequence

ATGTATTTAT TTGTATTTGT ATTTTTTGTA TTTATTTTTG TGGGTGATTT GCTTGCAAGT 60
GCCCCATGTG CGTGCCTAGT GCCCTCAGAG GTCAGAAGAG ACTATTAAAT CTGAAACGAG 120
TTAGATTGTG AGTGATGTGG GTCCTGGGAA TCAAACCGAT GTCTTATGCA AGAACAAGTG 180
CTGTTAACCT TGGAGTCATC TTCACTCCTT ATATAATGTA TCTCAATCAC ATAATCTCAC 240
TATATAATGT ATCTCAATCC CCTTATTCCT CTTCCACTCC TCCAGACCCC ACCTAACATG 300
TGTCCTCTTT AAGAAAAACA ACTCCTAGAG TCCAGTCCAG TTAGTACTGC CAGCATGCAC 360
ATAGATGTGG GCCATCTATT AGAACATGGC AACCAGCCAG GGCCACATAC TTAGAAAATT 420
GACTCTCCCT TCCACAGAAA CCATTAACTG CCAATAACTG CTAAAACAAC CCCTCAGGTA 480
GAAGTGGTAC CATGTAACAA CCACTGCCCT CCGCTCTGGA ATGTTGACTG GCTTGATTTT 540
GTGCAGGTCT TAATGTAGAA AACCATAGGT GCCGTGAGCT CTCAAGTGTA ACAGCCAGGC 600
CACGTCATGA AGACAGCTTG TTGGAGTGTT CCTGCTCATC TCCTGGCTAG TACACTCTTT 660
CCACTTCCCC TTCCTTGATA TTACCTGGGC CCTCAGGGCT CTTACTGTTG TGATTGCTTC 720
AAGACCATTG CTGTAGAGAG GGAGTTCTCA GAATAAGTCA GTTTCTCTTT TGCTCTGATA 780
GTTTGCTCGG TGTATAAGGT TTCAGTGTAT ATTGCTTCAC GTGTTCCTGT CTGTCCCATA 840
GACTGCTCCT GACTGTCCTG GTTGCCCAAT TGAGCAACCA CTCTCTTACT TCCTTGACTG 900
CTCCAGACTT CCTCCATCAG AACTCAGCTC ATTTGCACCC TGCACTTTTG GGTCTCAGTC 960
AGTTCAGTGT TGTCCGGAAA TCACTGCCCT TTCATAACCT GTCTCTCACA ACCCACCTTC 1020
TGTCCCTTCA TGGCCTTGAC TCCTTCTGTA GTTCTGTTTA GTCATTTTGT GTTTTGAATG 1080
AATGAATGAA TGAATGATTA AGTTTTATAT CTGAAACTAA AGTAAGGTAT TGATTTCTCC 1140
AAAAAGGTAG CACTAGCCTG TGACTGGCCC AGTGGATGAT ATGGAGTTTT GGGCTGGGGG 1200
CCACGCCCTG TTTGTTCTGA TTACTGTTCT CTTGCTTCAC ATAGCCACCA CAGAGAGCAT 1260
CAGGGGCTTG AAATTGCTTA TATCTCTGTC TGGGCCCCAC ATGTGTGTGC AGGTTAATGG 1320
GCTCTGCAAG AGTCTAGGTA GGATATTAAT CCAGGTACCA GTGCCAGTCC TGCCATGCAC 1380
ATAGGCAGGA ACTGATAGAC TTACAGAACT TTAAAATCTA ACATGTGAGG TCAAGTATTG 1440
TGTTGCCTGC CTGCAATATG TAACTAGAGA AACTGATGCA GGAGGTGCAG GGAGATTGGA 1500
AATTTAAGAG TAGCTTGGAC AATAATGCAA AGGCTTTGTC TCAAAAACCA ACCAGAAAAG 1560
GCTGGCAAGA TGGCTCAGCG 1580