EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-12544

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr18:60912960-60913640

Target genes

Number: 12
Name	Ensembl ID

F830016B08Rik	ENSMUSG00000090942
BC023105	ENSMUSG00000063388
2010002N04Rik	ENSMUSG00000038059
Dctn4	ENSMUSG00000024603
Rbm22	ENSMUSG00000024604
Synpo	ENSMUSG00000043079
Ndst1	ENSMUSG00000054008
Rps14	ENSMUSG00000024608
Gm8731	ENSMUSG00000080779
Cd74	ENSMUSG00000024610
Tcof1	ENSMUSG00000024613
Arsi	ENSMUSG00000036412

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU1F1	MA0784.1	chr18:60913486-60913500	TTGATTTGCATAAT	-	6.32
POU2F1	MA0785.1	chr18:60913488-60913500	GATTTGCATAAT	-	6.22
POU2F2	MA0507.1	chr18:60913486-60913499	TTGATTTGCATAA	+	6.03
SP1	MA0079.4	chr18:60913455-60913470	TAAGCCACACCCCCC	+	6.01

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_02074	chr18:60912388-60927074	Macrophage
mSE_12232	chr18:60913002-60913604	Spleen

Enhancer Sequence

AAGAAAAGAA GAGAGCCTCC TGTAATCCCT CCTTTAACAC TGCTATTGTT ATGCTCCAAT 60
TACAATCTGA CAAAGACAAA GACAAACACT CTCAGGGGCC AGTGGTTTCT AAGTGACTGT 120
TATCAGCAAG TGGCTCAAGG TTCCCTGAGG ACAGGGCTAG GTGGAGGAGC CCAGCCTCTA 180
TCTAGGCTGC AGACCAGAGA GCAGGCCGCC AGGGCCTCAT GTAGTCAAGG CTGCCTCAAC 240
CTAGCTGTGT GGTTGAACTT TTGGTTCTCC CTCCTCTACC TCTTAAGTGG TAATGTGGCC 300
CATGCCACCA CACCTGGTTT ATGCCTTGCT GAGAAATCGA ATCCCCTGGA ACCCCGGCTT 360
GATGCAGGCT AGGCAAGCGT CCTACCAGCT GAGTTAACAT TCCAGTCCTT AGCGTGTCTT 420
TCGTTTTGTT GTACAGTGGG GGCTAAAGAG TGGGATACCA GGCCTCACAC ACACATTAGA 480
CAGGCTCTCT GCCACTAAGC CACACCCCCC ATCCCAGCTC ATATCATTGA TTTGCATAAT 540
TCCGTTTGAG CTTATTGGCG GCTGAGTTTC TGACTTCTGA ACTACTCCAG TTCTCTTTAA 600
AGAAACAGAG AGGGCTGGAG AGCCGGCCCT GCTGTAAGAG CACTTGCTGC TCTTGCAGAG 660
GTCTGGAGTT CAGTTCCTAG 680