EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-12238

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr18:35880270-35880970

Target genes

Number: 11
Name	Ensembl ID

Gm5239	ENSMUSG00000062742
Matr3	ENSMUSG00000037236
Paip2	ENSMUSG00000037058
Slc23a1	ENSMUSG00000024354
2010001M09Rik	ENSMUSG00000024353
Gm1614	ENSMUSG00000073600
Spata24	ENSMUSG00000024352
Dnajc18	ENSMUSG00000024350
Ecscr	ENSMUSG00000073599
Ube2d2	ENSMUSG00000091896
Cxxc5	ENSMUSG00000046668

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr18:35880340-35880355	CTAACCACGCCCACG	+	6.2
SP4	MA0685.1	chr18:35880340-35880357	CTAACCACGCCCACGCC	+	6.1

Enhancer Sequence

GTGGCCACAA GAACTCCTAA CTTTGCTGAC CTCTGCTTCC TAATCCCTAC CTGCTTCACT 60
TCTTTCCAGT CTAACCACGC CCACGCCCCT GTTTTCCTCA GCAGCATAGT TTAGGGTTGA 120
AAAGCAGCAT TGGGGATGTA GCTCAGTGGT GGAGCACTTA CTTAGCATGT GTGAGCTTGG 180
GTGAGGCCCT AGGACCAATC CCCAGCACAA GAGAAAAAAT AAATAAATAA ATAAAAAGTG 240
GGGAATTTGA GTTCTGGCTT CACTCACAGC CTGAGCTGGA CCTGGCCTCT CTGGAATGTG 300
AGACTGAGGT ATAATTCTGC ATAAGTCCCG TGCTGGATTC TCAGCATCAC ACCACTGGGG 360
TGGGGTGGGG GAGAGCCTCC GAGGTTGTTG AGGGGAAAAG AAAATACATA CAAAGCCCAC 420
AGCCCCTGAC ACTTGCTCAA TCGGTGCTAG ATGTTGACAT TTTTGCCCCA TTCTCTTGAT 480
TTCTCCAAAT CTAAAGACTG GCTGACTCTC CACAGCCAGA ACCCCTGTGT TGGCGTGAAT 540
GTGACTGTCT CTCTAGACAG TTCCTCAGCC GCCACAACTG CTGACAACTG CTGTGAATGC 600
CCAGCTGAAG AAGTTGGGCA AGCTAGGGTG CCAGTGGGTT AGACAAAGTC TAGGCTGGCA 660
TTAGGAAGGC CTGCGGAATC CCTCATAAAT CCCCCACACT 700