EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM098-11504

Organism

Mus musculus

Tissue/cell

Lung_neonate

Coordinate

chr17:47029410-47029870

Target genes

Number: 11
Name	Ensembl ID

Ptk7	ENSMUSG00000023972
Mea1	ENSMUSG00000002768
Ppp2r5d	ENSMUSG00000059409
Pex6	ENSMUSG00000002763
Gnmt	ENSMUSG00000002769
Cnpy3	ENSMUSG00000023973
Ptcra	ENSMUSG00000036858
2310039H08Rik	ENSMUSG00000062619
Tbcc	ENSMUSG00000036430
Prph2	ENSMUSG00000023978
Ubr2	ENSMUSG00000023977

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr17:47029656-47029673	CGGTCATCCAGAGGTCA	+	7.18
Rarb(var.2)	MA0858.1	chr17:47029656-47029673	CGGTCATCCAGAGGTCA	+	7.04
TFAP2B(var.2)	MA0812.1	chr17:47029539-47029550	AGCCTGAGGCT	-	6.02

Enhancer Sequence

CATCTTTGTG TTTTGTTTTG TTTTTTTTTT GTTTGTTTTA AAGGTGAGCC CCCATCCTAG 60
CCCATGTTAA CCTGGGACTC ACTCTGTAGG CTGGCCTCAG AACTCAGCCT CCTGAAGGCT 120
GGGATTTGGA GCCTGAGGCT TCACTCCCCG TGGTGCCCCA TCTCTACAAC ACACTCAATA 180
GCACTGAACT GGGAAGAGAG CTAAGCACAG GCCACATTAA GTTGCCCGTC ATAGCCATGC 240
GGCTAGCGGT CATCCAGAGG TCAGTGTGCT GAGTGAAGTT CCCTAACACC CTCTCTTACC 300
GCCTTGTTCC CCTCCAGAAA CCACTCCAGC AGTATTACTT GCAGCATTTA CGTTTTTTGC 360
TTTGATTTGC TTTTGAGAGT GGTCTCACTG TGTAGCCCCA ACTCTGGCAC TTGCTGTCGC 420
AAAGATACAC TTGGCTGTCC CTCAGTAATG AGGTTGCAGG 460